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Aliases for MIR3918 Gene

Subcategory (RNA class) for MIR3918 Gene

miRNA

Quality Score for this RNA gene is

8

Aliases for MIR3918 Gene

  • MicroRNA 3918 2 3 5
  • Hsa-Mir-3918 3
  • Mir-3918 3

External Ids for MIR3918 Gene

Previous GeneCards Identifiers for MIR3918 Gene

  • GC06U902095
  • GC06M159193
  • GC06M159195
  • GC06M159198

Summaries for MIR3918 Gene

Entrez Gene Summary for MIR3918 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3918 Gene

MIR3918 (MicroRNA 3918) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3918 Gene

Genomics for MIR3918 Gene

Regulatory Elements for MIR3918 Gene

Enhancers for MIR3918 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F158759 0.2 ENCODE 0.8 +4.3 4290 1.0 KLF1 POLR2A MNT EZR MIR3918 AMZ2P2
GH06F158761 0.5 ENCODE 0.8 +1.3 1340 3.6 ATF1 ARNT CREB3L1 GATA2 KLF13 NCOA1 MBD2 MEF2D SMARCA4 MYNN EZR LOC442272 RNU6-293P ENSG00000229502 TMEM181 MIR3918 AMZ2P2
GH06F158758 0.2 ENCODE 0.4 +6.2 6180 0.2 BCOR TAL1 ZMYM3 ZIC2 RAD21 HIC1 GLIS2 POLR2A PATZ1 ZSCAN29 RNU6-293P LOC442272 MIR3918 AMZ2P2
GH06F158750 1.4 Ensembl ENCODE 0.4 +12.8 12752 3.0 CTCF EBF1 ZIC2 RAD21 ZNF101 POLR2A SCRT2 ZNF143 SMC3 MIXL1 LOC442272 RNU6-293P TMEM181 MIR3918 AMZ2P2
GH06F158736 1.1 Ensembl ENCODE 0.3 +27.0 27048 1.9 BCOR JUN ZMYM3 ZNF316 POLR2A HNF4G FOS MAFK TCF7L2 SMARCC1 LOC442272 RNU6-293P RSPH3 EZR AMZ2P2 MIR3918
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MIR3918 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR3918 Gene

Chromosome:
6
Start:
158,764,661 bp from pter
End:
158,764,753 bp from pter
Size:
93 bases
Orientation:
Minus strand

Genomic View for MIR3918 Gene

Genes around MIR3918 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3918 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3918 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3918 Gene

ORGUL Member Location for MIR3918 Gene

ORGUL Member Location for MIR3918 gene

Proteins for MIR3918 Gene

Post-translational modifications for MIR3918 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3918 Gene

Domains & Families for MIR3918 Gene

Gene Families for MIR3918 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3918: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3918 Gene

Function for MIR3918 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3918 Gene

Localization for MIR3918 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3918 Gene

Pathways & Interactions for MIR3918 Gene

SuperPathways for MIR3918 Gene

No Data Available

Interacting Proteins for MIR3918 Gene

Gene Ontology (GO) - Biological Process for MIR3918 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3918 Gene

Transcripts for MIR3918 Gene

mRNA/cDNA for MIR3918 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3918 Gene

No ASD Table

Relevant External Links for MIR3918 Gene

GeneLoc Exon Structure for
MIR3918
ECgene alternative splicing isoforms for
MIR3918

Expression for MIR3918 Gene

mRNA expression in normal human tissues for MIR3918 Gene

mRNA differential expression in normal tissues according to GTEx for MIR3918 Gene

This gene is overexpressed in Whole Blood (x15.2).

NURSA nuclear receptor signaling pathways regulating expression of MIR3918 Gene:

MIR3918
genes like me logo Genes that share expression patterns with MIR3918: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR3918 Gene

Orthologs for MIR3918 Gene

Evolution for MIR3918 Gene

ENSEMBL:
Gene Tree for MIR3918 (if available)
TreeFam:
Gene Tree for MIR3918 (if available)

No data available for Orthologs for MIR3918 Gene

Paralogs for MIR3918 Gene

No data available for Paralogs for MIR3918 Gene

Variants for MIR3918 Gene

Sequence variations from dbSNP and Humsavar for MIR3918 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs1057038 -- 158,766,323(-) TGGAT(A/T)TTTTT downstream-variant-500B, upstream-variant-2KB, utr-variant-3-prime
rs1057386 -- 158,765,836(-) TCCTT(C/T)TCGTG upstream-variant-2KB, utr-variant-3-prime
rs1057416 -- 158,765,821(-) GCTTT(C/T)TCCTT upstream-variant-2KB, utr-variant-3-prime
rs1064306 -- 158,766,310(-) TAGTT(C/T)TTTTT downstream-variant-500B, upstream-variant-2KB, utr-variant-3-prime
rs111430236 -- 158,765,620(+) CTCCA(-/ACTT)ACTTA downstream-variant-500B, upstream-variant-2KB, utr-variant-3-prime

Relevant External Links for MIR3918 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3918

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR3918 Gene

Disorders for MIR3918 Gene

Relevant External Links for MIR3918

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR3918

No disorders were found for MIR3918 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3918 Gene

Publications for MIR3918 Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 3 64
  2. Discovery of novel microRNAs in female reproductive tract using next generation sequencing. (PMID: 20224791) Creighton C.J. … Gunaratne P.H. (PLoS ONE 2010) 3 64
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR3918 Gene

Sources for MIR3918 Gene

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