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Aliases for MIR3912 Gene

Subcategory (RNA class) for MIR3912 Gene

miRNA

Quality Score for this RNA gene is

8

Aliases for MIR3912 Gene

  • MicroRNA 3912 2 3 5
  • Hsa-Mir-3912 3
  • Mir-3912 3

External Ids for MIR3912 Gene

Previous GeneCards Identifiers for MIR3912 Gene

  • GC05U901494
  • GC05M170815

Summaries for MIR3912 Gene

Entrez Gene Summary for MIR3912 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3912 Gene

MIR3912 (MicroRNA 3912) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3912 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3912 Gene

Genomics for MIR3912 Gene

Regulatory Elements for MIR3912 Gene


Promoters for MIR3912 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000190632 -1740 3401 HDGF MLX ARNT ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 ZNF207

Genomic Location for MIR3912 Gene

Chromosome:
5
Start:
171,386,656 bp from pter
End:
171,386,760 bp from pter
Size:
105 bases
Orientation:
Minus strand

Genomic View for MIR3912 Gene

Genes around MIR3912 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3912 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3912 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3912 Gene

ORGUL Member Location for MIR3912 Gene

ORGUL Member Location for MIR3912 gene

Proteins for MIR3912 Gene

Post-translational modifications for MIR3912 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3912 Gene

Domains & Families for MIR3912 Gene

Gene Families for MIR3912 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3912: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3912 Gene

Function for MIR3912 Gene

Animal Model Products

CRISPR Products

miRNA Products

Clone Products

  • Applied Biological Materials Clones for MIR3912
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3912 Gene

Localization for MIR3912 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3912 Gene

Pathways & Interactions for MIR3912 Gene

SuperPathways for MIR3912 Gene

No Data Available

Interacting Proteins for MIR3912 Gene

Gene Ontology (GO) - Biological Process for MIR3912 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3912 Gene

Drugs & Compounds for MIR3912 Gene

No Compound Related Data Available

Transcripts for MIR3912 Gene

mRNA/cDNA for MIR3912 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

miRNA Products

Clone Products

  • Applied Biological Materials Clones for MIR3912
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3912 Gene

No ASD Table

Relevant External Links for MIR3912 Gene

GeneLoc Exon Structure for
MIR3912
ECgene alternative splicing isoforms for
MIR3912

Expression for MIR3912 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR3912 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3912 Gene:

MIR3912
genes like me logo Genes that share expression patterns with MIR3912: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3912 Gene

Orthologs for MIR3912 Gene

Evolution for MIR3912 Gene

ENSEMBL:
Gene Tree for MIR3912 (if available)
TreeFam:
Gene Tree for MIR3912 (if available)

No data available for Orthologs for MIR3912 Gene

Paralogs for MIR3912 Gene

No data available for Paralogs for MIR3912 Gene

Variants for MIR3912 Gene

Sequence variations from dbSNP and Humsavar for MIR3912 Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type
rs587777962 untested 171,387,948(+) CACCC(C/G/T)ATGGA nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime
rs1000234164 -- 171,386,338(+) CTGGG(G/T)GCGGT downstream-variant-500B, upstream-variant-2KB
rs1003320143 -- 171,388,599(+) GGGGG(A/G)GGGAG intron-variant, upstream-variant-2KB
rs1003441624 -- 171,387,315(+) CTTTG(A/G)GGTAA upstream-variant-2KB
rs1003837366 -- 171,386,468(+) TTAGT(C/T)GGGCG downstream-variant-500B, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR3912 Gene

Variant ID Type Subtype PubMed ID
nsv508387 CNV deletion 20534489
nsv830551 CNV loss 17160897
nsv830552 CNV gain 17160897

Relevant External Links for MIR3912 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3912

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3912 Gene

Disorders for MIR3912 Gene

Relevant External Links for MIR3912

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR3912

No disorders were found for MIR3912 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3912 Gene

Publications for MIR3912 Gene

  1. Birth and expression evolution of mammalian microRNA genes. (PMID: 23034410) Meunier J … Kaessmann H (Genome research 2013) 3 60
  2. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 3 60
  3. Discovery of novel microRNAs in female reproductive tract using next generation sequencing. (PMID: 20224791) Creighton CJ … Gunaratne PH (PloS one 2010) 3 60
  4. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 60

Products for MIR3912 Gene

Sources for MIR3912 Gene

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