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Aliases for MIR3909 Gene

Subcategory (RNA class) for MIR3909 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3909 Gene

  • MicroRNA 3909 2 3
  • Hsa-Mir-3909 3
  • Mir-3909 3

External Ids for MIR3909 Gene

Previous GeneCards Identifiers for MIR3909 Gene

  • GC22U900741
  • GC22P035735

Summaries for MIR3909 Gene

Entrez Gene Summary for MIR3909 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3909 Gene

MIR3909 (MicroRNA 3909) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3909 Gene

Genomics for MIR3909 Gene

Genomic Location for MIR3909 Gene

Chromosome:
22
Start:
35,335,640 bp from pter
End:
35,335,758 bp from pter
Size:
119 bases
Orientation:
Plus strand

Genomic View for MIR3909 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR3909 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3909 Gene

No data available for Regulatory Elements for MIR3909 Gene

Proteins for MIR3909 Gene

Post-translational modifications for MIR3909 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3909 Gene

Domains & Families for MIR3909 Gene

Gene Families for MIR3909 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3909: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3909 Gene

Function for MIR3909 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3909 Gene

Localization for MIR3909 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3909 Gene

Pathways & Interactions for MIR3909 Gene

SuperPathways for MIR3909 Gene

No Data Available

Interacting Proteins for MIR3909 Gene

Gene Ontology (GO) - Biological Process for MIR3909 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3909 Gene

Drugs & Compounds for MIR3909 Gene

No Compound Related Data Available

Transcripts for MIR3909 Gene

mRNA/cDNA for MIR3909 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3909 Gene

No ASD Table

Relevant External Links for MIR3909 Gene

GeneLoc Exon Structure for
MIR3909
ECgene alternative splicing isoforms for
MIR3909

Expression for MIR3909 Gene

mRNA expression in normal human tissues for MIR3909 Gene

genes like me logo Genes that share expression patterns with MIR3909: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MIR3909 Gene

Orthologs for MIR3909 Gene

Evolution for MIR3909 Gene

ENSEMBL:
Gene Tree for MIR3909 (if available)
TreeFam:
Gene Tree for MIR3909 (if available)

No data available for Orthologs for MIR3909 Gene

Paralogs for MIR3909 Gene

No data available for Paralogs for MIR3909 Gene

Variants for MIR3909 Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR3909 Gene

Variant ID Type Subtype PubMed ID
nsv914994 CNV Loss 21882294
nsv914995 CNV Loss 21882294

Relevant External Links for MIR3909 Gene

HapMap Linkage Disequilibrium report
MIR3909

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for MIR3909 Gene

Disorders for MIR3909 Gene

Relevant External Links for MIR3909

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR3909
genes like me logo Genes that share disorders with MIR3909: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3909 Gene

Publications for MIR3909 Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 67
  2. Discovery of novel microRNAs in female reproductive tract using next generation sequencing. (PMID: 20224791) Creighton C.J. … Gunaratne P.H. (PLoS ONE 2010) 67
  3. Deep sequencing of human nuclear and cytoplasmic small RNAs reveals an unexpectedly complex subcellular distribution of miRNAs and tRNA 3' trailers. (PMID: 20498841) Liao J.Y. … Qu L.H. (PLoS ONE 2010) 67
  4. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 67

Products for MIR3909 Gene

Sources for MIR3909 Gene

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