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Aliases for MIR3908 Gene

Subcategory (RNA class) for MIR3908 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3908 Gene

  • MicroRNA 3908 2 3 5
  • Hsa-Mir-3908 3

External Ids for MIR3908 Gene

Previous GeneCards Identifiers for MIR3908 Gene

  • GC12U901507
  • GC12P124022

Summaries for MIR3908 Gene

Entrez Gene Summary for MIR3908 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3908 Gene

MIR3908 (MicroRNA 3908) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3908 Gene

Genomics for MIR3908 Gene

Genomic Location for MIR3908 Gene

Chromosome:
12
Start:
123,536,409 bp from pter
End:
123,536,534 bp from pter
Size:
126 bases
Orientation:
Plus strand

Genomic View for MIR3908 Gene

Genes around MIR3908 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3908 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3908 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3908 Gene

No data available for Regulatory Elements for MIR3908 Gene

Proteins for MIR3908 Gene

Post-translational modifications for MIR3908 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3908 Gene

Domains & Families for MIR3908 Gene

Gene Families for MIR3908 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3908: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3908 Gene

Function for MIR3908 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3908 Gene

Localization for MIR3908 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3908 Gene

Pathways & Interactions for MIR3908 Gene

SuperPathways for MIR3908 Gene

No Data Available

Interacting Proteins for MIR3908 Gene

Gene Ontology (GO) - Biological Process for MIR3908 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3908 Gene

Drugs & Compounds for MIR3908 Gene

No Compound Related Data Available

Transcripts for MIR3908 Gene

mRNA/cDNA for MIR3908 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3908 Gene

No ASD Table

Relevant External Links for MIR3908 Gene

GeneLoc Exon Structure for
MIR3908
ECgene alternative splicing isoforms for
MIR3908

Expression for MIR3908 Gene

mRNA expression in normal human tissues for MIR3908 Gene

genes like me logo Genes that share expression patterns with MIR3908: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MIR3908 Gene

Orthologs for MIR3908 Gene

Evolution for MIR3908 Gene

ENSEMBL:
Gene Tree for MIR3908 (if available)
TreeFam:
Gene Tree for MIR3908 (if available)

No data available for Orthologs for MIR3908 Gene

Paralogs for MIR3908 Gene

No data available for Paralogs for MIR3908 Gene

Variants for MIR3908 Gene

Sequence variations from dbSNP and Humsavar for MIR3908 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs2333832 -- 123,536,161(+) ttacc(C/T)gactc upstream-variant-2KB
rs2333833 -- 123,536,166(+) cgact(C/G)tggtg upstream-variant-2KB
rs34387970 -- 123,535,942(+) AATAC(-/A)AAAAA upstream-variant-2KB
rs55873974 -- 123,536,126(+) TAAAT(A/T)AATAA upstream-variant-2KB
rs59807069 -- 123,536,976(+) CTCTC(C/T)CTCCC downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for MIR3908 Gene

Variant ID Type Subtype PubMed ID
esv2422416 CNV Duplication 17116639

Relevant External Links for MIR3908 Gene

HapMap Linkage Disequilibrium report
MIR3908

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3908 Gene

Disorders for MIR3908 Gene

Relevant External Links for MIR3908

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR3908

No disorders were found for MIR3908 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3908 Gene

Publications for MIR3908 Gene

  1. Discovery of novel microRNAs in female reproductive tract using next generation sequencing. (PMID: 20224791) Creighton C.J. … Gunaratne P.H. (PLoS ONE 2010) 3 67
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3

Products for MIR3908 Gene

Sources for MIR3908 Gene

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