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Aliases for MIR3689F Gene

Subcategory (RNA class) for MIR3689F Gene


Quality Score for this RNA gene is


Aliases for MIR3689F Gene

  • MicroRNA 3689f 2 3 5
  • Hsa-Mir-3689f 3
  • Mir-3689f 3

External Ids for MIR3689F Gene

Previous GeneCards Identifiers for MIR3689F Gene

  • GC09U901733
  • GC09M137759
  • GC09M137771
  • GC09M137782
  • GC09M134858
  • GC09M134862
  • GC09M134874
  • GC09M134884
  • GC09M134891
  • GC09M134898
  • GC09M134909

Summaries for MIR3689F Gene

Entrez Gene Summary for MIR3689F Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3689F Gene

MIR3689F (MicroRNA 3689f) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3689F Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3689F Gene

Genomics for MIR3689F Gene

GeneHancer (GH) Regulatory Elements for MIR3689F Gene

Promoters and enhancers for MIR3689F Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I134858 Enhancer 0.8 ENCODE 0.4 -7.8 -7803 1 PKNOX1 BMI1 BATF KLF5 IRF4 RAD21 RCOR1 ATF7 ETV6 BCLAF1 FCN1 PPP1R26-AS1 FCN2 MIR3689F LOC101448202
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR3689F on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR3689F Gene

Genomic Locations for MIR3689F Gene
66 bases
Minus strand

Genomic View for MIR3689F Gene

Genes around MIR3689F on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3689F Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3689F Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3689F Gene

ORGUL Member Location for MIR3689F Gene

ORGUL Member Location for MIR3689F gene

Proteins for MIR3689F Gene

Post-translational modifications for MIR3689F Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3689F Gene

Domains & Families for MIR3689F Gene

Gene Families for MIR3689F Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3689F: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3689F Gene

Function for MIR3689F Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3689F Gene

Localization for MIR3689F Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3689F Gene

Pathways & Interactions for MIR3689F Gene

SuperPathways for MIR3689F Gene

No Data Available

Interacting Proteins for MIR3689F Gene

Gene Ontology (GO) - Biological Process for MIR3689F Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR3689F Gene

Drugs & Compounds for MIR3689F Gene

No Compound Related Data Available

Transcripts for MIR3689F Gene

mRNA/cDNA for MIR3689F Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3689F Gene

No ASD Table

Relevant External Links for MIR3689F Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR3689F Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR3689F Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3689F Gene:

genes like me logo Genes that share expression patterns with MIR3689F: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3689F Gene

Orthologs for MIR3689F Gene

Evolution for MIR3689F Gene

Gene Tree for MIR3689F (if available)
Gene Tree for MIR3689F (if available)

No data available for Orthologs for MIR3689F Gene

Paralogs for MIR3689F Gene

No data available for Paralogs for MIR3689F Gene

Variants for MIR3689F Gene

Sequence variations from dbSNP and Humsavar for MIR3689F Gene

SNP ID Clin Chr 09 pos Variation AA Info Type
rs1003947700 -- 134,851,476(-) G/A upstream_transcript_variant
rs1003997012 -- 134,851,678(-) G/A upstream_transcript_variant
rs1004321706 -- 134,851,368(-) C/G upstream_transcript_variant
rs1010550411 -- 134,852,658(-) G/A upstream_transcript_variant
rs1011193841 -- 134,851,144(-) G/A upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR3689F Gene

Variant ID Type Subtype PubMed ID
esv25704 CNV gain 19812545
esv2739138 CNV deletion 23290073
esv2739249 CNV deletion 23290073
esv994946 CNV loss 20482838
nsv1043726 CNV gain 25217958
nsv1125319 OTHER inversion 24896259
nsv511431 CNV loss 21212237

Additional Variant Information for MIR3689F Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3689F Gene

Disorders for MIR3689F Gene

Additional Disease Information for MIR3689F

No disorders were found for MIR3689F Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3689F Gene

Publications for MIR3689F Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 3 58
  2. Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs. (PMID: 20733160) Jima DD … Hematologic Malignancies Research Consortium (Blood 2010) 3 58
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR3689F Gene

Sources for MIR3689F Gene

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