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Aliases for MIR3689B Gene

Subcategory (RNA class) for MIR3689B Gene


Quality Score for this RNA gene is


Aliases for MIR3689B Gene

  • MicroRNA 3689b 2 3 5
  • Hsa-Mir-3689b 3
  • Mir-3689b 3

External Ids for MIR3689B Gene

Previous GeneCards Identifiers for MIR3689B Gene

  • GC09U901641
  • GC09M137757
  • GC09M137769
  • GC09M137781
  • GC09M134855
  • GC09M134859
  • GC09M134871
  • GC09M134881
  • GC09M134888
  • GC09M134895

Summaries for MIR3689B Gene

Entrez Gene Summary for MIR3689B Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3689B Gene

MIR3689B (MicroRNA 3689b) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3689B Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3689B Gene

Genomics for MIR3689B Gene

Regulatory Elements for MIR3689B Gene

Enhancers for MIR3689B Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09H135344 1.1 ENCODE dbSUPER 14.6 -493.9 -493858 0.2 NFIB ZSCAN4 ZNF76 KLF17 ZNF2 RAD21 ZEB1 ZNF143 CREM ZNF654 ENSG00000235572 MIR3689B C9orf62
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR3689B on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR3689B Gene

Genomic Locations for MIR3689B Gene
148 bases
Minus strand

Genomic View for MIR3689B Gene

Genes around MIR3689B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3689B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3689B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3689B Gene

ORGUL Member Location for MIR3689B Gene

ORGUL Member Location for MIR3689B gene

Proteins for MIR3689B Gene

Post-translational modifications for MIR3689B Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3689B Gene

Domains & Families for MIR3689B Gene

Gene Families for MIR3689B Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3689B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3689B Gene

Function for MIR3689B Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3689B Gene

Localization for MIR3689B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3689B Gene

Pathways & Interactions for MIR3689B Gene

SuperPathways for MIR3689B Gene

No Data Available

Interacting Proteins for MIR3689B Gene

Gene Ontology (GO) - Biological Process for MIR3689B Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR3689B Gene

Drugs & Compounds for MIR3689B Gene

No Compound Related Data Available

Transcripts for MIR3689B Gene

mRNA/cDNA for MIR3689B Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3689B Gene

No ASD Table

Relevant External Links for MIR3689B Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR3689B Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR3689B Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3689B Gene:

genes like me logo Genes that share expression patterns with MIR3689B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3689B Gene

Orthologs for MIR3689B Gene

Evolution for MIR3689B Gene

Gene Tree for MIR3689B (if available)
Gene Tree for MIR3689B (if available)

No data available for Orthologs for MIR3689B Gene

Paralogs for MIR3689B Gene

No data available for Paralogs for MIR3689B Gene

Variants for MIR3689B Gene

Sequence variations from dbSNP and Humsavar for MIR3689B Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs1003947700 -- 134,851,476(+) GGTGT(A/G)CACAG intron-variant, upstream-variant-2KB
rs1003997012 -- 134,851,678(+) AGATG(A/G)AGGTG intron-variant, upstream-variant-2KB
rs1004321706 -- 134,851,368(+) TGCAG(C/G)TGAAT intron-variant, upstream-variant-2KB
rs1011193841 -- 134,851,144(+) TCTAG(A/G)TCCAC intron-variant, upstream-variant-2KB
rs1014947984 -- 134,851,392(+) TAAAC(A/G)TCCTG intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR3689B Gene

Variant ID Type Subtype PubMed ID
nsv511431 CNV loss 21212237
nsv1125319 OTHER inversion 24896259
nsv1043726 CNV gain 25217958
esv994946 CNV loss 20482838
esv2739248 CNV deletion 23290073
esv2739138 CNV deletion 23290073
esv25704 CNV gain 19812545

Relevant External Links for MIR3689B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3689B Gene

Disorders for MIR3689B Gene

Relevant External Links for MIR3689B

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR3689B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3689B Gene

Publications for MIR3689B Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 3 60
  2. Discovery of novel microRNAs in female reproductive tract using next generation sequencing. (PMID: 20224791) Creighton CJ … Gunaratne PH (PloS one 2010) 3 60
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 60

Products for MIR3689B Gene

Sources for MIR3689B Gene

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