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Aliases for MIR3688-2 Gene

Subcategory (RNA class) for MIR3688-2 Gene


Quality Score for this RNA gene is


Aliases for MIR3688-2 Gene

  • MicroRNA 3688-2 2 3 5
  • Hsa-Mir-3688-2 3
  • Mir-3688-2 3

External Ids for MIR3688-2 Gene

Previous GeneCards Identifiers for MIR3688-2 Gene

  • GC04U901496
  • GC04M160051
  • GC04P160052

Summaries for MIR3688-2 Gene

Entrez Gene Summary for MIR3688-2 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3688-2 Gene

MIR3688-2 (MicroRNA 3688-2) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3688-2 Gene

Genomics for MIR3688-2 Gene

Regulatory Elements for MIR3688-2 Gene

Enhancers for MIR3688-2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04F159102 1.1 ENCODE 0.3 -23.6 -23611 5.9 PKNOX1 ARID4B SIN3A FEZF1 ZNF2 YY1 ZNF143 ZNF207 FOS ZNF263 C4orf45 C4orf46 ENSG00000271817 ETFDH RAPGEF2 MIR3688-2
GH04F159117 0.6 Ensembl 0.4 -10.8 -10805 0.4 GATAD2A MYNN CEBPA CEBPB CEBPG C4orf45 RAPGEF2 MIR3688-2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR3688-2 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR3688-2 Gene

159,128,805 bp from pter
159,128,891 bp from pter
87 bases
Plus strand

Genomic View for MIR3688-2 Gene

Genes around MIR3688-2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3688-2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3688-2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3688-2 Gene

Proteins for MIR3688-2 Gene

Post-translational modifications for MIR3688-2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3688-2 Gene

Domains & Families for MIR3688-2 Gene

Gene Families for MIR3688-2 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3688-2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3688-2 Gene

Function for MIR3688-2 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3688-2 Gene

Localization for MIR3688-2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3688-2 Gene

Pathways & Interactions for MIR3688-2 Gene

SuperPathways for MIR3688-2 Gene

No Data Available

Interacting Proteins for MIR3688-2 Gene

Gene Ontology (GO) - Biological Process for MIR3688-2 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR3688-2 Gene

Transcripts for MIR3688-2 Gene

mRNA/cDNA for MIR3688-2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3688-2 Gene

No ASD Table

Relevant External Links for MIR3688-2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR3688-2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR3688-2 Gene

genes like me logo Genes that share expression patterns with MIR3688-2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR3688-2 Gene

Orthologs for MIR3688-2 Gene

Evolution for MIR3688-2 Gene

Gene Tree for MIR3688-2 (if available)
Gene Tree for MIR3688-2 (if available)

No data available for Orthologs for MIR3688-2 Gene

Paralogs for MIR3688-2 Gene

No data available for Paralogs for MIR3688-2 Gene

Variants for MIR3688-2 Gene

Sequence variations from dbSNP and Humsavar for MIR3688-2 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs115962290 -- 159,128,323(+) ATTGG(A/C)TCTTA intron-variant, downstream-variant-500B, upstream-variant-2KB
rs116561839 -- 159,127,840(+) TTCAG(C/G)CTTGT intron-variant, upstream-variant-2KB
rs13119750 -- 159,127,349(+) TGATA(C/T)TATTT intron-variant, upstream-variant-2KB
rs13133931 -- 159,128,921(+) TGGGG(G/T)GTGTG intron-variant, downstream-variant-500B, upstream-variant-2KB
rs139274640 -- 159,127,083(+) GTGCA(A/G)TGGTG intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR3688-2 Gene

Variant ID Type Subtype PubMed ID
nsv4572 CNV insertion 18451855

Relevant External Links for MIR3688-2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3688-2 Gene

Disorders for MIR3688-2 Gene

Relevant External Links for MIR3688-2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR3688-2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3688-2 Gene

Publications for MIR3688-2 Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 3 64
  2. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H. … Rovira C. (Cancer Res. 2011) 3 64
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR3688-2 Gene

Sources for MIR3688-2 Gene

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