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Aliases for MIR3685 Gene

Subcategory (RNA class) for MIR3685 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3685 Gene

  • MicroRNA 3685 2 3 5
  • Hsa-Mir-3685 3

External Ids for MIR3685 Gene

Previous GeneCards Identifiers for MIR3685 Gene

  • GC12U901499
  • GC12P095707
  • GC12P095710
  • GC12P095713

Summaries for MIR3685 Gene

Entrez Gene Summary for MIR3685 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3685 Gene

MIR3685 (MicroRNA 3685) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3685 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3685 Gene

Genomics for MIR3685 Gene

GeneHancer (GH) Regulatory Elements for MIR3685 Gene

Promoters and enhancers for MIR3685 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I095318 Enhancer 0.9 ENCODE 0.4 +8.3 8305 1.4 CLOCK FOXA2 MLX ARID4B SIN3A YY1 FOS RXRA SP5 REST GC12P095319 RNU6-808P FGD6 MIR3685 LOC105369917
GH12I095317 Enhancer 0.5 ENCODE 0.4 +7.4 7404 0.4 ZNF3 FOXA2 ETV4 SMAD4 HMG20A RARA RNU6-808P GC12P095319 MIR3685 LOC105369917
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR3685 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR3685 Gene

Genomic Locations for MIR3685 Gene
chr12:95,309,923-95,309,984
(GRCh38/hg38)
Size:
62 bases
Orientation:
Plus strand
chr12:95,703,699-95,703,760
(GRCh37/hg19)

Genomic View for MIR3685 Gene

Genes around MIR3685 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3685 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3685 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3685 Gene

Proteins for MIR3685 Gene

Post-translational modifications for MIR3685 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3685 Gene

Domains & Families for MIR3685 Gene

Gene Families for MIR3685 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3685: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3685 Gene

Function for MIR3685 Gene

Phenotypes From GWAS Catalog for MIR3685 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3685 Gene

Localization for MIR3685 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3685 Gene

Pathways & Interactions for MIR3685 Gene

SuperPathways for MIR3685 Gene

No Data Available

Interacting Proteins for MIR3685 Gene

Gene Ontology (GO) - Biological Process for MIR3685 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3685 Gene

Drugs & Compounds for MIR3685 Gene

No Compound Related Data Available

Transcripts for MIR3685 Gene

mRNA/cDNA for MIR3685 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3685 Gene

No ASD Table

Relevant External Links for MIR3685 Gene

GeneLoc Exon Structure for
MIR3685
ECgene alternative splicing isoforms for
MIR3685

Expression for MIR3685 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR3685 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3685 Gene:

MIR3685
genes like me logo Genes that share expression patterns with MIR3685: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3685 Gene

Orthologs for MIR3685 Gene

Evolution for MIR3685 Gene

ENSEMBL:
Gene Tree for MIR3685 (if available)
TreeFam:
Gene Tree for MIR3685 (if available)

No data available for Orthologs for MIR3685 Gene

Paralogs for MIR3685 Gene

No data available for Paralogs for MIR3685 Gene

Variants for MIR3685 Gene

Sequence variations from dbSNP and Humsavar for MIR3685 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000105323 -- 95,309,841(+) T/C upstream_transcript_variant
rs1000207216 -- 95,309,341(+) A/G upstream_transcript_variant
rs1001853226 -- 95,308,209(+) G/A upstream_transcript_variant
rs1003594841 -- 95,308,089(+) T/C upstream_transcript_variant
rs1005298479 -- 95,310,201(+) A/C downstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR3685 Gene

Variant ID Type Subtype PubMed ID
nsv7234 OTHER inversion 18451855

Additional Variant Information for MIR3685 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3685

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3685 Gene

Disorders for MIR3685 Gene

Additional Disease Information for MIR3685

No disorders were found for MIR3685 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3685 Gene

Publications for MIR3685 Gene

  1. Analysis of microRNA transcriptome by deep sequencing of small RNA libraries of peripheral blood. (PMID: 20459673) Vaz C … Bhattacharya A (BMC genomics 2010) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR3685 Gene

Sources for MIR3685 Gene

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