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Aliases for MIR3684 Gene

Subcategory (RNA class) for MIR3684 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3684 Gene

  • MicroRNA 3684 2 3 5
  • Hsa-Mir-3684 3

External Ids for MIR3684 Gene

Previous GeneCards Identifiers for MIR3684 Gene

  • GC04U901412
  • GC04P099920

Summaries for MIR3684 Gene

Entrez Gene Summary for MIR3684 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3684 Gene

MIR3684 (MicroRNA 3684) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3684 Gene

Genomics for MIR3684 Gene

Regulatory Elements for MIR3684 Gene

Enhancers for MIR3684 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04F098994 1.1 ENCODE 0.8 -0.5 -499 5.1 HDGF PKNOX1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 CBX5 ZNF143 ENSG00000272777 LOC100507053 EIF4E ADH5 RNU7-149P ADH1A ADH4 METAP1 MIR3684
GH04F099013 1 Ensembl ENCODE 0.3 +16.4 16365 0.9 SOX13 TBP ZNF133 CEBPG DMAP1 ZNF644 POLR2A TRIM24 HOMEZ SOX5 ENSG00000272777 EIF4E ABT1P1 MIR3684
GH04F099002 0.4 Ensembl 0.4 +5.6 5614 0.8 CEBPB RNU7-149P EIF4E MIR3684 ABT1P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR3684 on UCSC Golden Path with GeneCards custom track

Promoters for MIR3684 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001246047 -1487 2601 HDGF PKNOX1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 CBX5 ZNF143

Genomic Location for MIR3684 Gene

Chromosome:
4
Start:
98,997,387 bp from pter
End:
98,997,460 bp from pter
Size:
74 bases
Orientation:
Plus strand

Genomic View for MIR3684 Gene

Genes around MIR3684 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3684 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3684 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3684 Gene

Proteins for MIR3684 Gene

Post-translational modifications for MIR3684 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3684 Gene

Domains & Families for MIR3684 Gene

Gene Families for MIR3684 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3684: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3684 Gene

Function for MIR3684 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3684 Gene

Localization for MIR3684 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3684 Gene

Pathways & Interactions for MIR3684 Gene

SuperPathways for MIR3684 Gene

No Data Available

Interacting Proteins for MIR3684 Gene

Gene Ontology (GO) - Biological Process for MIR3684 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3684 Gene

Transcripts for MIR3684 Gene

mRNA/cDNA for MIR3684 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3684 Gene

No ASD Table

Relevant External Links for MIR3684 Gene

GeneLoc Exon Structure for
MIR3684
ECgene alternative splicing isoforms for
MIR3684

Expression for MIR3684 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3684 Gene:

MIR3684
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR3684 Gene

Orthologs for MIR3684 Gene

Evolution for MIR3684 Gene

ENSEMBL:
Gene Tree for MIR3684 (if available)
TreeFam:
Gene Tree for MIR3684 (if available)

No data available for Orthologs for MIR3684 Gene

Paralogs for MIR3684 Gene

No data available for Paralogs for MIR3684 Gene

Variants for MIR3684 Gene

Sequence variations from dbSNP and Humsavar for MIR3684 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs10035037 -- 98,997,510(+) CTGAA(A/C)TTAAG intron-variant, downstream-variant-500B
rs111540873 -- 98,996,081(+) GGGGG(C/G)GGGGG intron-variant, upstream-variant-2KB
rs112431785 -- 98,997,177(+) AAAAG(G/T)GTTTT intron-variant, upstream-variant-2KB
rs112499432 -- 98,997,594(+) TATGT(A/G)TTACA intron-variant, downstream-variant-500B
rs113500508 -- 98,995,440(+) GGGGG(A/G)CCCTG upstream-variant-2KB

Relevant External Links for MIR3684 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3684

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR3684 Gene

Disorders for MIR3684 Gene

Relevant External Links for MIR3684

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR3684

No disorders were found for MIR3684 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3684 Gene

Publications for MIR3684 Gene

  1. Analysis of microRNA transcriptome by deep sequencing of small RNA libraries of peripheral blood. (PMID: 20459673) Vaz C. … Bhattacharya A. (BMC Genomics 2010) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR3684 Gene

Sources for MIR3684 Gene

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