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Aliases for MIR3682 Gene

Subcategory (RNA class) for MIR3682 Gene

miRNA

Quality Score for this RNA gene is

8

Aliases for MIR3682 Gene

  • MicroRNA 3682 2 3 5
  • Hsa-Mir-3682 3
  • Mir-3682 3

External Ids for MIR3682 Gene

Previous GeneCards Identifiers for MIR3682 Gene

  • GC02U902265
  • GC02M054079

Summaries for MIR3682 Gene

Entrez Gene Summary for MIR3682 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3682 Gene

MIR3682 (MicroRNA 3682) is an RNA Gene, and is affiliated with the miRNA class.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3682 Gene

Genomics for MIR3682 Gene

Regulatory Elements for MIR3682 Gene

Enhancers for MIR3682 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G053850 1.1 ENCODE 0.7 -1.8 -1764 1.4 HDGF FOXA2 ARNT MLX ARID4B DMAP1 YY1 ZNF766 CBX5 PAF1 ACYP2 MIR3682 GPR75
GH02G053859 0.5 ENCODE 0.4 -10.7 -10654 0.9 SSRP1 ZNF316 GABPB1 ACYP2 GPR75 MIR3682
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR3682 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR3682 Gene

Chromosome:
2
Start:
53,849,122 bp from pter
End:
53,849,205 bp from pter
Size:
84 bases
Orientation:
Minus strand

Genomic View for MIR3682 Gene

Genes around MIR3682 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3682 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3682 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3682 Gene

ORGUL Member Location for MIR3682 Gene

ORGUL Member Location for MIR3682 gene

Proteins for MIR3682 Gene

Post-translational modifications for MIR3682 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3682 Gene

Domains & Families for MIR3682 Gene

Gene Families for MIR3682 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3682: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3682 Gene

Function for MIR3682 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3682 Gene

Localization for MIR3682 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3682 Gene

Pathways & Interactions for MIR3682 Gene

SuperPathways for MIR3682 Gene

No Data Available

Interacting Proteins for MIR3682 Gene

Gene Ontology (GO) - Biological Process for MIR3682 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3682 Gene

Drugs & Compounds for MIR3682 Gene

No Compound Related Data Available

Transcripts for MIR3682 Gene

mRNA/cDNA for MIR3682 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3682 Gene

No ASD Table

Relevant External Links for MIR3682 Gene

GeneLoc Exon Structure for
MIR3682
ECgene alternative splicing isoforms for
MIR3682

Expression for MIR3682 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR3682 Gene

mRNA differential expression in normal tissues according to GTEx for MIR3682 Gene

This gene is overexpressed in Brain - Caudate (basal ganglia) (x6.0), Brain - Hippocampus (x5.5), Brain - Substantia nigra (x5.1), Brain - Nucleus accumbens (basal ganglia) (x4.5), Brain - Frontal Cortex (BA9) (x4.5), Brain - Putamen (basal ganglia) (x4.3), and Brain - Amygdala (x4.1).

NURSA nuclear receptor signaling pathways regulating expression of MIR3682 Gene:

MIR3682
genes like me logo Genes that share expression patterns with MIR3682: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3682 Gene

Orthologs for MIR3682 Gene

Evolution for MIR3682 Gene

ENSEMBL:
Gene Tree for MIR3682 (if available)
TreeFam:
Gene Tree for MIR3682 (if available)

No data available for Orthologs for MIR3682 Gene

Paralogs for MIR3682 Gene

No data available for Paralogs for MIR3682 Gene

Variants for MIR3682 Gene

Sequence variations from dbSNP and Humsavar for MIR3682 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1000080473 -- 53,848,814(+) CATTG(C/G)CATGC intron-variant, downstream-variant-500B
rs1002429761 -- 53,850,050(+) AGACT(C/T)CATCT intron-variant, upstream-variant-2KB
rs1003444765 -- 53,849,557(+) TTTAA(C/T)AGAGA intron-variant, upstream-variant-2KB
rs1003654435 -- 53,849,207(+) CTTAC(A/G)AAGAA intron-variant, upstream-variant-2KB
rs1005231702 -- 53,850,000(+) GCAGT(A/G)AGCCG intron-variant, upstream-variant-2KB

Relevant External Links for MIR3682 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3682

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR3682 Gene

Disorders for MIR3682 Gene

Relevant External Links for MIR3682

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR3682

No disorders were found for MIR3682 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3682 Gene

Publications for MIR3682 Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 3 64
  2. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H. … Rovira C. (Cancer Res. 2011) 3 64
  3. Analysis of microRNA transcriptome by deep sequencing of small RNA libraries of peripheral blood. (PMID: 20459673) Vaz C. … Bhattacharya A. (BMC Genomics 2010) 3 64
  4. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR3682 Gene

Sources for MIR3682 Gene

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