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Aliases for MIR3681 Gene

Subcategory (RNA class) for MIR3681 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3681 Gene

  • MicroRNA 3681 2 3 5
  • Hsa-Mir-3681 3

External Ids for MIR3681 Gene

Previous GeneCards Identifiers for MIR3681 Gene

  • GC02U902252
  • GC02P012342

Summaries for MIR3681 Gene

Entrez Gene Summary for MIR3681 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3681 Gene

MIR3681 (MicroRNA 3681) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3681 Gene

Genomics for MIR3681 Gene

Regulatory Elements for MIR3681 Gene

Enhancers for MIR3681 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F012201 1 Ensembl ENCODE 0.8 +3.2 3223 2.3 CTCF HDAC1 LEF1 GATA2 NR2F6 HES1 SMARCE1 BHLHE40 NRF1 NR2F1 MIR3681 GC02P012326
GH02F012276 1.7 FANTOM5 Ensembl ENCODE 0.2 +78.4 78418 2.4 ATF1 ARNT CREB3L1 GATA2 GTF2B NCOA1 REST SMARCB1 MBD2 MEF2D TRIB2 GC02P012326 MIR3681
GH02F012192 0.8 FANTOM5 Ensembl 0.4 -6.2 -6230 1.0 JUN GABPA LPIN1 LOC105373432 MIR3681
GH02F012262 1.2 FANTOM5 Ensembl ENCODE 0.2 +64.4 64371 3.0 PKNOX1 CBX3 RFX1 MAFG ZNF83 ZNF316 SMARCA4 ZNF585B CBX5 KDM1A TRIB2 MIR3681 GC02P012326
GH02F012287 1.1 Ensembl ENCODE 0.2 +88.3 88317 0.9 TBP HDAC1 ATF1 PKNOX1 ETV1 ZNF664 POLR2A TRIM24 SMARCE1 MTA2 GC02P012326 MIR3681
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR3681 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR3681 Gene

Chromosome:
2
Start:
12,199,130 bp from pter
End:
12,199,201 bp from pter
Size:
72 bases
Orientation:
Plus strand

Genomic View for MIR3681 Gene

Genes around MIR3681 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3681 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3681 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3681 Gene

Proteins for MIR3681 Gene

Post-translational modifications for MIR3681 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3681 Gene

Domains & Families for MIR3681 Gene

Gene Families for MIR3681 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3681: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3681 Gene

Function for MIR3681 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3681 Gene

Localization for MIR3681 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3681 Gene

Pathways & Interactions for MIR3681 Gene

SuperPathways for MIR3681 Gene

No Data Available

Interacting Proteins for MIR3681 Gene

Gene Ontology (GO) - Biological Process for MIR3681 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3681 Gene

Transcripts for MIR3681 Gene

mRNA/cDNA for MIR3681 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3681 Gene

No ASD Table

Relevant External Links for MIR3681 Gene

GeneLoc Exon Structure for
MIR3681
ECgene alternative splicing isoforms for
MIR3681

Expression for MIR3681 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3681 Gene:

MIR3681
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR3681 Gene

Orthologs for MIR3681 Gene

Evolution for MIR3681 Gene

ENSEMBL:
Gene Tree for MIR3681 (if available)
TreeFam:
Gene Tree for MIR3681 (if available)

No data available for Orthologs for MIR3681 Gene

Paralogs for MIR3681 Gene

No data available for Paralogs for MIR3681 Gene

Variants for MIR3681 Gene

Sequence variations from dbSNP and Humsavar for MIR3681 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs10199976 -- 12,197,495(+) ccttt(G/T)taagg intron-variant, upstream-variant-2KB
rs10200170 -- 12,197,666(+) ataac(A/T)gtcca intron-variant, upstream-variant-2KB
rs10202729 -- 12,197,851(+) TGAGT(G/T)CTACA intron-variant, upstream-variant-2KB
rs10210767 -- 12,197,805(+) CCATT(G/T)GTTAG intron-variant, upstream-variant-2KB
rs11685038 -- 12,198,450(+) CTCAC(A/C)TACCT intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR3681 Gene

Variant ID Type Subtype PubMed ID
nsv1001333 CNV loss 25217958

Relevant External Links for MIR3681 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3681

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3681 Gene

Disorders for MIR3681 Gene

Relevant External Links for MIR3681

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR3681

No disorders were found for MIR3681 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3681 Gene

Publications for MIR3681 Gene

  1. Analysis of microRNA transcriptome by deep sequencing of small RNA libraries of peripheral blood. (PMID: 20459673) Vaz C. … Bhattacharya A. (BMC Genomics 2010) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR3681 Gene

Sources for MIR3681 Gene

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