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Aliases for MIR3675 Gene

Subcategory (RNA class) for MIR3675 Gene

miRNA

Quality Score for this RNA gene is

8

Aliases for MIR3675 Gene

  • MicroRNA 3675 2 3 5
  • Hsa-Mir-3675 3

External Ids for MIR3675 Gene

Previous GeneCards Identifiers for MIR3675 Gene

  • GC01U903112
  • GC01M017188

Summaries for MIR3675 Gene

Entrez Gene Summary for MIR3675 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3675 Gene

MIR3675 (MicroRNA 3675) is an RNA Gene, and is affiliated with the miRNA class.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3675 Gene

Genomics for MIR3675 Gene

Regulatory Elements for MIR3675 Gene

Enhancers for MIR3675 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G016859 0.8 Ensembl 0.7 -0.8 -810 1.5 TBP ESRRA ARNT SREBF2 ZSCAN4 ZNF76 ZBTB40 ZNF316 POLR2A FOXK2 MST1L MIR3675 TRV-CAC11-2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR3675 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR3675 Gene

Chromosome:
1
Start:
16,858,949 bp from pter
End:
16,859,021 bp from pter
Size:
73 bases
Orientation:
Minus strand

Genomic View for MIR3675 Gene

Genes around MIR3675 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3675 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3675 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3675 Gene

ORGUL Member Location for MIR3675 Gene

ORGUL Member Location for MIR3675 gene

Proteins for MIR3675 Gene

Post-translational modifications for MIR3675 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3675 Gene

Domains & Families for MIR3675 Gene

Gene Families for MIR3675 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3675: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3675 Gene

Function for MIR3675 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3675 Gene

Localization for MIR3675 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3675 Gene

Pathways & Interactions for MIR3675 Gene

SuperPathways for MIR3675 Gene

No Data Available

Interacting Proteins for MIR3675 Gene

Gene Ontology (GO) - Biological Process for MIR3675 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3675 Gene

Transcripts for MIR3675 Gene

mRNA/cDNA for MIR3675 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3675 Gene

No ASD Table

Relevant External Links for MIR3675 Gene

GeneLoc Exon Structure for
MIR3675
ECgene alternative splicing isoforms for
MIR3675

Expression for MIR3675 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3675 Gene:

MIR3675
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3675 Gene

Orthologs for MIR3675 Gene

Evolution for MIR3675 Gene

ENSEMBL:
Gene Tree for MIR3675 (if available)
TreeFam:
Gene Tree for MIR3675 (if available)

No data available for Orthologs for MIR3675 Gene

Paralogs for MIR3675 Gene

No data available for Paralogs for MIR3675 Gene

Variants for MIR3675 Gene

Sequence variations from dbSNP and Humsavar for MIR3675 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1008977668 -- 16,860,811(+) AGTAG(A/C)AAGTA upstream-variant-2KB
rs1009008747 -- 16,860,139(+) GATAA(A/T)AGAAA upstream-variant-2KB
rs1010469882 -- 16,860,922(+) TGTTG(A/G)GCAAA upstream-variant-2KB
rs1019517475 -- 16,860,181(+) TGCCT(C/T)TTTTG upstream-variant-2KB
rs1019897003 -- 16,860,928(+) GCAAA(C/G)AACAG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR3675 Gene

Variant ID Type Subtype PubMed ID
dgv101n100 CNV gain 25217958
dgv104n100 CNV loss 25217958
dgv105n100 CNV gain+loss 25217958
dgv106n100 CNV gain 25217958
dgv107n100 CNV gain 25217958
dgv108n100 CNV gain 25217958
dgv109n100 CNV gain+loss 25217958
dgv10e201 CNV deletion 23290073
dgv166n54 CNV gain+loss 21841781
dgv1e203 CNV gain+loss 21179565
dgv1n68 CNV loss 17160897
dgv20n67 CNV gain 20364138
dgv21e199 CNV deletion 23128226
dgv21n67 CNV gain 20364138
dgv39n100 CNV gain 25217958
dgv40n100 CNV gain 25217958
dgv41n100 CNV gain 25217958
dgv42n100 CNV loss 25217958
dgv43n100 CNV loss 25217958
dgv44n100 CNV gain+loss 25217958
dgv45n100 CNV gain 25217958
dgv46n100 CNV gain 25217958
dgv47n100 CNV gain+loss 25217958
dgv48n100 CNV gain+loss 25217958
dgv49e59 CNV duplication 20981092
dgv49n100 CNV loss 25217958
dgv49n106 CNV duplication 24896259
dgv50n100 CNV gain 25217958
dgv50n106 CNV duplication 24896259
dgv51n100 CNV loss 25217958
dgv52n100 CNV gain+loss 25217958
dgv53n100 CNV loss 25217958
dgv54e59 CNV duplication 20981092
dgv54n100 CNV gain 25217958
dgv55n100 CNV gain+loss 25217958
dgv59n100 CNV gain 25217958
dgv60n100 CNV loss 25217958
dgv61n100 CNV gain+loss 25217958
dgv62n100 CNV gain 25217958
dgv63n100 CNV gain 25217958
dgv65n100 CNV gain 25217958
dgv66n100 CNV gain 25217958
dgv68n100 CNV gain 25217958
dgv70n100 CNV gain+loss 25217958
dgv71n100 CNV loss 25217958
dgv72n100 CNV gain+loss 25217958
dgv73n100 CNV gain 25217958
dgv74n100 CNV gain 25217958
dgv75n100 CNV gain 25217958
dgv76n100 CNV gain 25217958
dgv77n100 CNV loss 25217958
dgv78n100 CNV loss 25217958
dgv79n100 CNV gain 25217958
dgv80n100 CNV loss 25217958
dgv81n100 CNV gain+loss 25217958
dgv82n100 CNV gain+loss 25217958
dgv83n100 CNV loss 25217958
dgv85n100 CNV gain 25217958
dgv86n100 CNV gain 25217958
dgv87n100 CNV loss 25217958
dgv91n100 CNV gain+loss 25217958
dgv92n100 CNV gain 25217958
esv26111 CNV gain+loss 19812545
esv2678817 CNV deletion 23128226
esv2750816 CNV gain 17911159
esv2758925 CNV gain+loss 17122850
esv29642 CNV gain+loss 19812545
esv29948 CNV loss 18421352
esv33046 CNV loss 17666407
esv33965 CNV gain+loss 17666407
esv3429389 CNV duplication 20981092
esv34697 CNV gain 17911159
esv3577752 CNV loss 25503493
esv3892303 CNV gain+loss 25118596
esv3892414 CNV gain 25118596
esv6890 OTHER inversion 19470904
nsv1001952 CNV gain+loss 25217958
nsv1003019 CNV loss 25217958
nsv1004807 CNV gain+loss 25217958
nsv1005904 CNV gain 25217958
nsv1006828 CNV gain+loss 25217958
nsv1008129 CNV gain+loss 25217958
nsv1014044 CNV gain 25217958
nsv1076319 CNV duplication 25765185
nsv1077282 CNV duplication 25765185
nsv1116446 OTHER inversion 24896259
nsv1132284 CNV duplication 24896259
nsv1139475 CNV duplication 24896259
nsv1145756 CNV duplication 26484159
nsv1151399 CNV duplication 26484159
nsv1152149 CNV duplication 26484159
nsv1161242 CNV duplication 26073780
nsv1161246 CNV duplication 26073780
nsv1161255 CNV duplication 26073780
nsv1161259 CNV duplication 26073780
nsv428421 CNV gain+loss 18775914
nsv436652 OTHER inversion 17901297
nsv436814 CNV insertion 17901297
nsv469795 CNV gain+loss 16826518
nsv471655 CNV gain+loss 15918152
nsv545669 CNV loss 21841781
nsv545672 CNV loss 21841781
nsv7173 OTHER inversion 18451855
nsv821037 CNV duplication 20802225
nsv821511 CNV duplication 20802225
nsv829625 CNV gain 20364138
nsv834203 CNV loss 17160897
nsv834258 CNV loss 17160897
nsv834269 CNV loss 17160897
nsv9324 CNV gain+loss 18304495
nsv945793 CNV duplication 23825009
nsv945795 CNV duplication 23825009
nsv945800 CNV duplication 23825009
nsv954847 CNV duplication 24416366
nsv954848 CNV duplication 24416366

Relevant External Links for MIR3675 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3675

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3675 Gene

Disorders for MIR3675 Gene

Relevant External Links for MIR3675

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR3675

No disorders were found for MIR3675 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3675 Gene

Publications for MIR3675 Gene

  1. Analysis of microRNA transcriptome by deep sequencing of small RNA libraries of peripheral blood. (PMID: 20459673) Vaz C. … Bhattacharya A. (BMC Genomics 2010) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR3675 Gene

Sources for MIR3675 Gene

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