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Aliases for MIR3663 Gene

Subcategory (RNA class) for MIR3663 Gene

miRNA

Quality Score for this RNA gene is

8

Aliases for MIR3663 Gene

  • MicroRNA 3663 2 3 5
  • Hsa-Mir-3663 3

External Ids for MIR3663 Gene

Previous GeneCards Identifiers for MIR3663 Gene

  • GC10U901449
  • GC10M118930

Summaries for MIR3663 Gene

Entrez Gene Summary for MIR3663 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3663 Gene

MIR3663 (MicroRNA 3663) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3663 Gene

Genomics for MIR3663 Gene

Regulatory Elements for MIR3663 Gene

Enhancers for MIR3663 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10F117168 0.5 ENCODE 0.8 -0.5 -511 0.2 KLF17 SIN3A ZNF48 ZNF2 RAD21 GLIS2 ZNF366 ZNF143 KLF7 ZNF391 VAX1 RPL12P26 KCNK18 MIR3663 MIR3663HG
GH10F117167 0.3 FANTOM5 0.8 +0.6 586 0.1 CBX2 VAX1 RPL12P26 KCNK18 C10orf82 MIR3663
GH10F117163 0.6 FANTOM5 0.8 +4.5 4515 0.1 CTCF SUZ12 BCL11B ZNF2 HIC1 ZFHX2 GLIS2 PATZ1 ZNF547 ZNF600 VAX1 MIR3663
GH10F117166 0.3 FANTOM5 0.8 +1.2 1208 0.1 CBX2 PRDM10 KDM1A VAX1 RPL12P26 KCNK18 MIR3663
GH10F117165 0.2 ENCODE 0.8 +1.8 1830 0.2 CTCF SUZ12 ZNF2 RAD21 ZNF121 GLIS2 PATZ1 SMC3 ZNF391 ZNF600 VAX1 RPL12P26 KCNK18 MIR3663
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MIR3663 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR3663 Gene

Chromosome:
10
Start:
117,167,678 bp from pter
End:
117,167,774 bp from pter
Size:
97 bases
Orientation:
Minus strand

Genomic View for MIR3663 Gene

Genes around MIR3663 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3663 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3663 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3663 Gene

ORGUL Member Location for MIR3663 Gene

ORGUL Member Location for MIR3663 gene

Proteins for MIR3663 Gene

Post-translational modifications for MIR3663 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3663 Gene

Domains & Families for MIR3663 Gene

Gene Families for MIR3663 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3663: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3663 Gene

Function for MIR3663 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3663 Gene

Localization for MIR3663 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3663 Gene

Pathways & Interactions for MIR3663 Gene

SuperPathways for MIR3663 Gene

No Data Available

Interacting Proteins for MIR3663 Gene

Gene Ontology (GO) - Biological Process for MIR3663 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3663 Gene

Transcripts for MIR3663 Gene

mRNA/cDNA for MIR3663 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3663 Gene

No ASD Table

Relevant External Links for MIR3663 Gene

GeneLoc Exon Structure for
MIR3663
ECgene alternative splicing isoforms for
MIR3663

Expression for MIR3663 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR3663 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3663 Gene:

MIR3663
genes like me logo Genes that share expression patterns with MIR3663: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR3663 Gene

Orthologs for MIR3663 Gene

Evolution for MIR3663 Gene

ENSEMBL:
Gene Tree for MIR3663 (if available)
TreeFam:
Gene Tree for MIR3663 (if available)

No data available for Orthologs for MIR3663 Gene

Paralogs for MIR3663 Gene

No data available for Paralogs for MIR3663 Gene

Variants for MIR3663 Gene

Sequence variations from dbSNP and Humsavar for MIR3663 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs111394803 -- 117,168,763(+) TCCAC(A/C)CCCCC intron-variant, upstream-variant-2KB
rs111525499 -- 117,167,745(+) ACCAC(A/G)CAGAC intron-variant, nc-transcript-variant
rs113896596 -- 117,168,855(+) GCAGT(A/C)ACACC intron-variant, upstream-variant-2KB
rs117520659 -- 117,167,860(+) TGACT(G/T)CTGTG intron-variant, upstream-variant-2KB
rs12241463 -- 117,167,348(+) tttaa(C/G)ttttt intron-variant, downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for MIR3663 Gene

Variant ID Type Subtype PubMed ID
esv3624671 CNV gain 21293372
esv3624674 CNV gain 21293372
nsv832002 CNV gain+loss 17160897

Relevant External Links for MIR3663 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3663

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3663 Gene

Disorders for MIR3663 Gene

Relevant External Links for MIR3663

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR3663

No disorders were found for MIR3663 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3663 Gene

Publications for MIR3663 Gene

  1. Deep sequencing of human nuclear and cytoplasmic small RNAs reveals an unexpectedly complex subcellular distribution of miRNAs and tRNA 3' trailers. (PMID: 20498841) Liao J.Y. … Qu L.H. (PLoS ONE 2010) 3 64
  2. Re-inspection of small RNA sequence datasets reveals several novel human miRNA genes. (PMID: 20532037) Hansen T.B. … Kjems J. (PLoS ONE 2010) 3 64
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR3663 Gene

Sources for MIR3663 Gene

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