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Aliases for MIR3658 Gene

Subcategory (RNA class) for MIR3658 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3658 Gene

  • MicroRNA 3658 2 3 5
  • Hsa-Mir-3658 3

External Ids for MIR3658 Gene

Previous GeneCards Identifiers for MIR3658 Gene

  • GC01U903155
  • GC01P165882

Summaries for MIR3658 Gene

Entrez Gene Summary for MIR3658 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3658 Gene

MIR3658 (MicroRNA 3658) is an RNA Gene, and is affiliated with the miRNA class. Among its related pathways are Pyrimidine metabolism and Purine metabolism (REACTOME).

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3658 Gene

Genomics for MIR3658 Gene

Regulatory Elements for MIR3658 Gene

Enhancers for MIR3658 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G165902 0.9 ENCODE dbSUPER 0.7 -4.1 -4096 2.0 ATF1 SIN3A YBX1 CHAMP1 NCOR1 IKZF1 ZNF24 FOS CREM PRDM1 UCK2 ENSG00000236364 TMCO1 LOC100147773 LOC105371586 MIR3658
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR3658 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR3658 Gene

Chromosome:
1
Start:
165,907,921 bp from pter
End:
165,907,976 bp from pter
Size:
56 bases
Orientation:
Plus strand

Genomic View for MIR3658 Gene

Genes around MIR3658 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3658 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3658 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3658 Gene

Proteins for MIR3658 Gene

Post-translational modifications for MIR3658 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3658 Gene

Domains & Families for MIR3658 Gene

Gene Families for MIR3658 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3658: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3658 Gene

Function for MIR3658 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3658 Gene

Localization for MIR3658 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3658 Gene

Pathways & Interactions for MIR3658 Gene

genes like me logo Genes that share pathways with MIR3658: view

Pathways by source for MIR3658 Gene

1 BioSystems pathway for MIR3658 Gene

Interacting Proteins for MIR3658 Gene

Gene Ontology (GO) - Biological Process for MIR3658 Gene

None

No data available for SIGNOR curated interactions for MIR3658 Gene

Drugs & Compounds for MIR3658 Gene

No Compound Related Data Available

Transcripts for MIR3658 Gene

mRNA/cDNA for MIR3658 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3658 Gene

No ASD Table

Relevant External Links for MIR3658 Gene

GeneLoc Exon Structure for
MIR3658
ECgene alternative splicing isoforms for
MIR3658

Expression for MIR3658 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR3658 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3658 Gene:

MIR3658
genes like me logo Genes that share expression patterns with MIR3658: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3658 Gene

Orthologs for MIR3658 Gene

Evolution for MIR3658 Gene

ENSEMBL:
Gene Tree for MIR3658 (if available)
TreeFam:
Gene Tree for MIR3658 (if available)

No data available for Orthologs for MIR3658 Gene

Paralogs for MIR3658 Gene

No data available for Paralogs for MIR3658 Gene

Variants for MIR3658 Gene

Sequence variations from dbSNP and Humsavar for MIR3658 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1004928471 -- 165,906,685(+) TTATT(G/T)TTTTG intron-variant, upstream-variant-2KB
rs1005389258 -- 165,906,407(+) AGAGA(C/T)GAGGT intron-variant, upstream-variant-2KB
rs1007365790 -- 165,906,376(+) ACTTA(C/T)TTTTC intron-variant, upstream-variant-2KB
rs1007507169 -- 165,906,605(+) TCAAG(C/T)GACCC intron-variant, upstream-variant-2KB
rs1009629637 -- 165,907,155(+) GATGT(G/T)TATTC intron-variant, upstream-variant-2KB

Relevant External Links for MIR3658 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3658

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR3658 Gene

Disorders for MIR3658 Gene

Relevant External Links for MIR3658

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR3658

No disorders were found for MIR3658 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3658 Gene

Publications for MIR3658 Gene

  1. Upregulation of miR-3658 in bladder cancer and tumor progression. (PMID: 27820650) Chen Y.J. … Wang J.S. (Genet. Mol. Res. 2016) 3 64
  2. Discovery of microRNAs and other small RNAs in solid tumors. (PMID: 20483914) Meiri E. … Sitbon E. (Nucleic Acids Res. 2010) 3 64
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR3658 Gene

Sources for MIR3658 Gene

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