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Aliases for MIR3651 Gene

Subcategory (RNA class) for MIR3651 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3651 Gene

  • MicroRNA 3651 2 3 5
  • Hsa-Mir-3651 3
  • Mir-3651 3

External Ids for MIR3651 Gene

Previous GeneCards Identifiers for MIR3651 Gene

  • GC09U901627
  • GC09M095055

Summaries for MIR3651 Gene

Entrez Gene Summary for MIR3651 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3651 Gene

MIR3651 (MicroRNA 3651) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3651 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3651 Gene

Genomics for MIR3651 Gene

GeneHancer (GH) Regulatory Elements for MIR3651 Gene

Promoters and enhancers for MIR3651 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I092291 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 550.8 -1.5 -1469 5.1 HDGF PKNOX1 CLOCK SMAD1 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 MIR3651 SNORA84 IARS CENPP OGN SPTLC1 NOL8 IPPK
GH09I092241 Enhancer 0.8 Ensembl ENCODE 0.2 +47.6 47603 7.4 PAF1 GATAD2A CTCF RXRA SAP130 RAD21 SSRP1 HNF1A HNF4A FOS CENPP OGN LINC00475 ENSG00000236115 IARS MIR3651
GH09I092265 Enhancer 0.5 ENCODE 0.3 +27.0 27010 1.1 JUND JUN CEBPB FOS CENPP MIR3651 IARS ENSG00000236115
GH09I092278 Enhancer 0.3 ENCODE 0.4 +14.2 14223 0.2 JUND CENPP NOL8 ENSG00000236115 SPTLC1 MIR3651 IARS
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR3651 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR3651 Gene

Genomic Locations for MIR3651 Gene
chr9:92,292,458-92,292,547
(GRCh38/hg38)
Size:
90 bases
Orientation:
Minus strand
chr9:95,054,740-95,054,829
(GRCh37/hg19)

Genomic View for MIR3651 Gene

Genes around MIR3651 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3651 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3651 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3651 Gene

Proteins for MIR3651 Gene

Post-translational modifications for MIR3651 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3651 Gene

Domains & Families for MIR3651 Gene

Gene Families for MIR3651 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3651: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3651 Gene

Function for MIR3651 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3651 Gene

Localization for MIR3651 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3651 Gene

Pathways & Interactions for MIR3651 Gene

SuperPathways for MIR3651 Gene

No Data Available

Interacting Proteins for MIR3651 Gene

Gene Ontology (GO) - Biological Process for MIR3651 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3651 Gene

Drugs & Compounds for MIR3651 Gene

No Compound Related Data Available

Transcripts for MIR3651 Gene

mRNA/cDNA for MIR3651 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3651 Gene

No ASD Table

Relevant External Links for MIR3651 Gene

GeneLoc Exon Structure for
MIR3651
ECgene alternative splicing isoforms for
MIR3651

Expression for MIR3651 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3651 Gene:

MIR3651
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3651 Gene

Orthologs for MIR3651 Gene

Evolution for MIR3651 Gene

ENSEMBL:
Gene Tree for MIR3651 (if available)
TreeFam:
Gene Tree for MIR3651 (if available)

No data available for Orthologs for MIR3651 Gene

Paralogs for MIR3651 Gene

No data available for Paralogs for MIR3651 Gene

Variants for MIR3651 Gene

Sequence variations from dbSNP and Humsavar for MIR3651 Gene

SNP ID Clin Chr 09 pos Variation AA Info Type
rs1001076258 -- 92,292,531(-) C/T non_coding_transcript_variant
rs1001128574 -- 92,292,205(-) G/C downstream_transcript_variant
rs1001854863 -- 92,294,391(-) A/G upstream_transcript_variant
rs1002316604 -- 92,293,279(-) G/T upstream_transcript_variant
rs1002369562 -- 92,294,068(-) A/G upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR3651 Gene

Variant ID Type Subtype PubMed ID
esv3891693 CNV gain 25118596
nsv1046733 CNV gain 25217958

Additional Variant Information for MIR3651 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3651

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3651 Gene

Disorders for MIR3651 Gene

Additional Disease Information for MIR3651

No disorders were found for MIR3651 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3651 Gene

Publications for MIR3651 Gene

  1. Clinical potential of miR-3651 as a novel prognostic biomarker for esophageal squamous cell cancer. (PMID: 26210449) Wang C … Cheng Y (Biochemical and biophysical research communications 2015) 3 58
  2. miR-186, miR-3651 and miR-494: potential biomarkers for oral squamous cell carcinoma extracted from whole blood. (PMID: 24452363) Ries J … Nkenke E (Oncology reports 2014) 3 58
  3. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 3 58
  4. Discovery of microRNAs and other small RNAs in solid tumors. (PMID: 20483914) Meiri E … Sitbon E (Nucleic acids research 2010) 3 58
  5. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR3651 Gene

Sources for MIR3651 Gene

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