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Aliases for MIR3651 Gene

Subcategory (RNA class) for MIR3651 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3651 Gene

  • MicroRNA 3651 2 3 5
  • Hsa-Mir-3651 3
  • Mir-3651 3

External Ids for MIR3651 Gene

Previous GeneCards Identifiers for MIR3651 Gene

  • GC09U901627
  • GC09M095055

Summaries for MIR3651 Gene

Entrez Gene Summary for MIR3651 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3651 Gene

MIR3651 (MicroRNA 3651) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3651 Gene

Genomics for MIR3651 Gene

Regulatory Elements for MIR3651 Gene

Enhancers for MIR3651 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F092278 0.2 ENCODE 0.4 +14.2 14224 0.2 JUND POLR2A CENPP NOL8 ENSG00000236115 SPTLC1 MIR3651 ENSG00000279007
GH09F092265 0.2 ENCODE 0.3 +27.0 27011 1.1 SOX13 TFAP4 JUN DMAP1 CEBPG RAD21 YY1 TEAD3 ZFHX2 POLR2A CENPP MIR3651 ENSG00000279007
GH09F092241 1.3 Ensembl ENCODE 0.2 +47.6 47604 7.4 ATF1 MLX CREB3L1 ARID4B SIN3A FEZF1 DMAP1 YY1 GLIS2 ZNF207 CENPP OGN LINC00475 ENSG00000279007 MIR3651
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MIR3651 on UCSC Golden Path with GeneCards custom track

Promoters for MIR3651 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001308401 -1053 2001 HDGF PKNOX1 ARNT CREB3L1 MLX WRNIP1 ARID4B SIN3A FEZF1 DMAP1

Genomic Location for MIR3651 Gene

Chromosome:
9
Start:
92,292,458 bp from pter
End:
92,292,547 bp from pter
Size:
90 bases
Orientation:
Minus strand

Genomic View for MIR3651 Gene

Genes around MIR3651 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3651 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3651 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3651 Gene

Proteins for MIR3651 Gene

Post-translational modifications for MIR3651 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3651 Gene

Domains & Families for MIR3651 Gene

Gene Families for MIR3651 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3651: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3651 Gene

Function for MIR3651 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3651 Gene

Localization for MIR3651 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3651 Gene

Pathways & Interactions for MIR3651 Gene

SuperPathways for MIR3651 Gene

No Data Available

Interacting Proteins for MIR3651 Gene

Gene Ontology (GO) - Biological Process for MIR3651 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3651 Gene

Transcripts for MIR3651 Gene

mRNA/cDNA for MIR3651 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3651 Gene

No ASD Table

Relevant External Links for MIR3651 Gene

GeneLoc Exon Structure for
MIR3651
ECgene alternative splicing isoforms for
MIR3651

Expression for MIR3651 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3651 Gene:

MIR3651
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR3651 Gene

Orthologs for MIR3651 Gene

Evolution for MIR3651 Gene

ENSEMBL:
Gene Tree for MIR3651 (if available)
TreeFam:
Gene Tree for MIR3651 (if available)

No data available for Orthologs for MIR3651 Gene

Paralogs for MIR3651 Gene

No data available for Paralogs for MIR3651 Gene

Variants for MIR3651 Gene

Sequence variations from dbSNP and Humsavar for MIR3651 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs10820966 -- 92,293,147(+) AATTT(A/T)GTTAT intron-variant, upstream-variant-2KB
rs112851185 -- 92,292,139(+) TAGCC(A/C/T)GCCAA intron-variant, downstream-variant-500B
rs114740000 -- 92,293,677(+) GGCGT(A/C)CACGC nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime
rs12004004 -- 92,293,949(+) TAGAC(C/T)GAGGT upstream-variant-2KB
rs139016908 -- 92,292,443(+) CAGCA(C/T)TGACT intron-variant, downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for MIR3651 Gene

Variant ID Type Subtype PubMed ID
esv3891693 CNV gain 25118596
nsv1046733 CNV gain 25217958

Relevant External Links for MIR3651 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3651

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3651 Gene

Disorders for MIR3651 Gene

Relevant External Links for MIR3651

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR3651

No disorders were found for MIR3651 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3651 Gene

Publications for MIR3651 Gene

  1. Clinical potential of miR-3651 as a novel prognostic biomarker for esophageal squamous cell cancer. (PMID: 26210449) Wang C. … Cheng Y. (Biochem. Biophys. Res. Commun. 2015) 3 64
  2. miR-186, miR-3651 and miR-494: potential biomarkers for oral squamous cell carcinoma extracted from whole blood. (PMID: 24452363) Ries J. … Nkenke E. (Oncol. Rep. 2014) 3 64
  3. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 3 64
  4. Discovery of microRNAs and other small RNAs in solid tumors. (PMID: 20483914) Meiri E. … Sitbon E. (Nucleic Acids Res. 2010) 3 64
  5. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR3651 Gene

Sources for MIR3651 Gene

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