Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MIR3622A Gene

Subcategory (RNA class) for MIR3622A Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3622A Gene

  • MicroRNA 3622a 2 3 5
  • Hsa-Mir-3622a 3
  • Mir-3622a 3

External Ids for MIR3622A Gene

Previous GeneCards Identifiers for MIR3622A Gene

  • GC08U901491
  • GC08M027562
  • GC08P027564

Summaries for MIR3622A Gene

Entrez Gene Summary for MIR3622A Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3622A Gene

MIR3622A (MicroRNA 3622a) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3622A Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3622A Gene

Genomics for MIR3622A Gene

GeneHancer (GH) Regulatory Elements for MIR3622A Gene

Promoters and enhancers for MIR3622A Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I027701 Enhancer 1.2 Ensembl ENCODE dbSUPER 550.8 +1.1 1055 2 ELF3 FOXA2 ARID4B DMAP1 THRB ZNF48 ZSCAN9 RARA YY1 ZNF366 ENSG00000279302 MIR3622A MIR3622B ENSG00000253875 SCARA3 CLU
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR3622A on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR3622A Gene

Genomic Locations for MIR3622A Gene
chr8:27,701,677-27,701,759
(GRCh38/hg38)
Size:
83 bases
Orientation:
Plus strand
chr8:27,559,194-27,559,276
(GRCh37/hg19)

Genomic View for MIR3622A Gene

Genes around MIR3622A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3622A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3622A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3622A Gene

Proteins for MIR3622A Gene

Post-translational modifications for MIR3622A Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3622A Gene

Domains & Families for MIR3622A Gene

Gene Families for MIR3622A Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3622A: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3622A Gene

Function for MIR3622A Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3622A Gene

Localization for MIR3622A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3622A Gene

Pathways & Interactions for MIR3622A Gene

SuperPathways for MIR3622A Gene

No Data Available

Interacting Proteins for MIR3622A Gene

Gene Ontology (GO) - Biological Process for MIR3622A Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3622A Gene

Drugs & Compounds for MIR3622A Gene

No Compound Related Data Available

Transcripts for MIR3622A Gene

mRNA/cDNA for MIR3622A Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3622A Gene

No ASD Table

Relevant External Links for MIR3622A Gene

GeneLoc Exon Structure for
MIR3622A
ECgene alternative splicing isoforms for
MIR3622A

Expression for MIR3622A Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3622A Gene:

MIR3622A
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3622A Gene

Orthologs for MIR3622A Gene

Evolution for MIR3622A Gene

ENSEMBL:
Gene Tree for MIR3622A (if available)
TreeFam:
Gene Tree for MIR3622A (if available)

No data available for Orthologs for MIR3622A Gene

Paralogs for MIR3622A Gene

No data available for Paralogs for MIR3622A Gene

Variants for MIR3622A Gene

Sequence variations from dbSNP and Humsavar for MIR3622A Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1000326158 -- 27,702,244(+) G/A downstream_transcript_variant
rs1001996988 -- 27,700,781(+) A/G/T upstream_transcript_variant
rs1003490503 -- 27,700,950(+) G/A upstream_transcript_variant
rs1003792387 -- 27,699,716(+) C/T upstream_transcript_variant
rs1005134308 -- 27,699,853(+) G/A upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR3622A Gene

Variant ID Type Subtype PubMed ID
nsv610867 CNV gain 21841781

Additional Variant Information for MIR3622A Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3622A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3622A Gene

Disorders for MIR3622A Gene

Additional Disease Information for MIR3622A

No disorders were found for MIR3622A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3622A Gene

Publications for MIR3622A Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 3 58
  2. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H … Rovira C (Cancer research 2011) 3 58
  3. Ultra-high throughput sequencing-based small RNA discovery and discrete statistical biomarker analysis in a collection of cervical tumours and matched controls. (PMID: 20459774) Witten D … Lui WO (BMC biology 2010) 3 58
  4. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR3622A Gene

Sources for MIR3622A Gene

Content
Loading form....