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Aliases for MIR3611 Gene

Subcategory (RNA class) for MIR3611 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3611 Gene

  • MicroRNA 3611 2 3 5
  • Hsa-Mir-3611 3

External Ids for MIR3611 Gene

Previous GeneCards Identifiers for MIR3611 Gene

  • GC10U901436
  • GC10M035369

Summaries for MIR3611 Gene

Entrez Gene Summary for MIR3611 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3611 Gene

MIR3611 (MicroRNA 3611) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3611 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3611 Gene

Genomics for MIR3611 Gene

GeneHancer (GH) Regulatory Elements for MIR3611 Gene

Promoters and enhancers for MIR3611 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I035079 Enhancer 0.6 ENCODE 550.8 -0.3 -314 1.1 ZC3H11A CEBPB CEBPG ZNF623 ZNF781 ZNF697 SP1 FOSL1 ATF4 JUND MIR3611 ENSG00000271335 CREM CUL2
GH10I035089 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.4 -10.7 -10712 2.4 HDGF PKNOX1 CLOCK ARNT ARID4B NEUROD1 SIN3A DMAP1 ZNF2 IRF4 CUL2 MIR3611 CREM
GH10I035074 Promoter 0.7 EPDnew 0.4 +5.4 5379 0.1 EGR1 EGR2 CUL2 MIR3611 GC10M034983
GH10I035092 Enhancer 0.6 FANTOM5 0.4 -13.3 -13292 0.3 USF2 RAD21 ZNF280A MITF MEF2D FOSL1 CBX1 CBX5 TRIM24 NR2C2 CREM MIR3611 CUL2
GH10I035040 Enhancer 0.8 Ensembl ENCODE 0.3 +38.5 38547 1.5 SCRT1 ZNF362 ZNF449 CEBPB TSHZ1 CEBPG ZNF121 JUND SCRT2 ZNF391 CUL2 PARD3 PARD3-AS1 CREM MIR3611 GC10M034983
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR3611 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR3611 Gene

Genomic Locations for MIR3611 Gene
chr10:35,079,598-35,079,680
(GRCh38/hg38)
Size:
83 bases
Orientation:
Minus strand
chr10:35,368,526-35,368,608
(GRCh37/hg19)

Genomic View for MIR3611 Gene

Genes around MIR3611 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3611 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3611 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3611 Gene

Proteins for MIR3611 Gene

Post-translational modifications for MIR3611 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3611 Gene

Domains & Families for MIR3611 Gene

Gene Families for MIR3611 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3611: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3611 Gene

Function for MIR3611 Gene

Phenotypes From GWAS Catalog for MIR3611 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3611 Gene

Localization for MIR3611 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3611 Gene

Pathways & Interactions for MIR3611 Gene

SuperPathways for MIR3611 Gene

No Data Available

Interacting Proteins for MIR3611 Gene

Gene Ontology (GO) - Biological Process for MIR3611 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3611 Gene

Drugs & Compounds for MIR3611 Gene

No Compound Related Data Available

Transcripts for MIR3611 Gene

mRNA/cDNA for MIR3611 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3611 Gene

No ASD Table

Relevant External Links for MIR3611 Gene

GeneLoc Exon Structure for
MIR3611
ECgene alternative splicing isoforms for
MIR3611

Expression for MIR3611 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR3611 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3611 Gene:

MIR3611
genes like me logo Genes that share expression patterns with MIR3611: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3611 Gene

Orthologs for MIR3611 Gene

Evolution for MIR3611 Gene

ENSEMBL:
Gene Tree for MIR3611 (if available)
TreeFam:
Gene Tree for MIR3611 (if available)

No data available for Orthologs for MIR3611 Gene

Paralogs for MIR3611 Gene

No data available for Paralogs for MIR3611 Gene

Variants for MIR3611 Gene

Sequence variations from dbSNP and Humsavar for MIR3611 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000435554 -- 35,080,937(-) G/A upstream_transcript_variant
rs1002090459 -- 35,081,083(-) G/A upstream_transcript_variant
rs1002231437 -- 35,079,756(-) G/A upstream_transcript_variant
rs1002365794 -- 35,079,468(-) C/G downstream_transcript_variant
rs1004385218 -- 35,080,311(-) C/A/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR3611 Gene

Variant ID Type Subtype PubMed ID
dgv706n100 CNV gain 25217958
nsv1039051 CNV gain 25217958
nsv507549 OTHER sequence alteration 20534489
nsv550398 CNV gain 21841781

Additional Variant Information for MIR3611 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3611

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3611 Gene

Disorders for MIR3611 Gene

Additional Disease Information for MIR3611

No disorders were found for MIR3611 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3611 Gene

Publications for MIR3611 Gene

  1. Ultra-high throughput sequencing-based small RNA discovery and discrete statistical biomarker analysis in a collection of cervical tumours and matched controls. (PMID: 20459774) Witten D … Lui WO (BMC biology 2010) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR3611 Gene

Sources for MIR3611 Gene

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