Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MIR3611 Gene

Subcategory (RNA class) for MIR3611 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3611 Gene

  • MicroRNA 3611 2 3 5
  • Hsa-Mir-3611 3

External Ids for MIR3611 Gene

Previous GeneCards Identifiers for MIR3611 Gene

  • GC10U901436
  • GC10M035369

Summaries for MIR3611 Gene

Entrez Gene Summary for MIR3611 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3611 Gene

MIR3611 (MicroRNA 3611) is an RNA Gene, and is affiliated with the miRNA class.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3611 Gene

Genomics for MIR3611 Gene

Regulatory Elements for MIR3611 Gene

Enhancers for MIR3611 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G035079 0.7 ENCODE 0.7 -0.3 -315 1.1 ESRRA CEBPG RAD21 FOSL1 GATA2 FOS ZNF426 CEBPB ZNF781 ZBTB7A ENSG00000271335 CREM MIR3611
GH10G035089 1.2 ENCODE 0.4 -10.7 -10713 2.4 HDGF FOXA2 PKNOX1 CREB3L1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 CUL2 MIR3611 CREM
GH10G035092 0.8 FANTOM5 0.4 -13.3 -13292 0.3 CTCF CBX3 ZNF384 RAD21 FOSL1 CBX5 NR2F6 TRIM24 NR2F1 USF2 CREM MIR3611
GH10G035040 1 Ensembl ENCODE 0.3 +38.5 38547 1.5 SCRT1 ZNF362 CEBPB TSHZ1 CEBPG POLR2H ZNF121 JUND POLR2A SCRT2 CUL2 PARD3 PARD3-AS1 CREM MIR3611 GC10M034983
GH10G035057 0.9 Ensembl ENCODE 0.3 +21.2 21154 1.8 JUND GATA2 JUN SIN3A FEZF1 FOS ZNF600 HNF4A MAFK NFE2L2 CREM CUL2 RNU7-77P MIR3611 GC10M034983
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR3611 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR3611 Gene

Chromosome:
10
Start:
35,079,598 bp from pter
End:
35,079,680 bp from pter
Size:
83 bases
Orientation:
Minus strand

Genomic View for MIR3611 Gene

Genes around MIR3611 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3611 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3611 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3611 Gene

Proteins for MIR3611 Gene

Post-translational modifications for MIR3611 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3611 Gene

Domains & Families for MIR3611 Gene

Gene Families for MIR3611 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3611: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3611 Gene

Function for MIR3611 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3611 Gene

Localization for MIR3611 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3611 Gene

Pathways & Interactions for MIR3611 Gene

SuperPathways for MIR3611 Gene

No Data Available

Interacting Proteins for MIR3611 Gene

Gene Ontology (GO) - Biological Process for MIR3611 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3611 Gene

Drugs & Compounds for MIR3611 Gene

No Compound Related Data Available

Transcripts for MIR3611 Gene

mRNA/cDNA for MIR3611 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3611 Gene

No ASD Table

Relevant External Links for MIR3611 Gene

GeneLoc Exon Structure for
MIR3611
ECgene alternative splicing isoforms for
MIR3611

Expression for MIR3611 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR3611 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3611 Gene:

MIR3611
genes like me logo Genes that share expression patterns with MIR3611: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3611 Gene

Orthologs for MIR3611 Gene

Evolution for MIR3611 Gene

ENSEMBL:
Gene Tree for MIR3611 (if available)
TreeFam:
Gene Tree for MIR3611 (if available)

No data available for Orthologs for MIR3611 Gene

Paralogs for MIR3611 Gene

No data available for Paralogs for MIR3611 Gene

Variants for MIR3611 Gene

Sequence variations from dbSNP and Humsavar for MIR3611 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs1000435554 -- 35,080,937(+) ACCCA(A/G)GTGTG intron-variant, upstream-variant-2KB
rs1002090459 -- 35,081,083(+) CCTCT(A/G)GTAAC intron-variant, upstream-variant-2KB
rs1002231437 -- 35,079,756(+) TAAAG(A/G)AAGCA intron-variant, upstream-variant-2KB
rs1002365794 -- 35,079,468(+) TCTGG(C/G)ACAGT intron-variant, downstream-variant-500B
rs1004385218 -- 35,080,311(+) GAATG(C/T)CCTTT intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR3611 Gene

Variant ID Type Subtype PubMed ID
dgv706n100 CNV gain 25217958
nsv1039051 CNV gain 25217958
nsv507549 OTHER sequence alteration 20534489
nsv550398 CNV gain 21841781

Relevant External Links for MIR3611 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3611

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3611 Gene

Disorders for MIR3611 Gene

Relevant External Links for MIR3611

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR3611

No disorders were found for MIR3611 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3611 Gene

Publications for MIR3611 Gene

  1. Ultra-high throughput sequencing-based small RNA discovery and discrete statistical biomarker analysis in a collection of cervical tumours and matched controls. (PMID: 20459774) Witten D. … Lui W.O. (BMC Biol. 2010) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR3611 Gene

Sources for MIR3611 Gene

Content
Loading form....