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Aliases for MIR335 Gene

Subcategory (RNA class) for MIR335 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR335 Gene

  • MicroRNA 335 2 3
  • Hsa-Mir-335 3
  • MiRNA335 3
  • MIRN335 3

External Ids for MIR335 Gene

ORGUL Members for MIR335 Gene

Previous Symbols for MIR335 Gene

  • MIRN335

Summaries for MIR335 Gene

Entrez Gene Summary for MIR335 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR335 Gene

MIR335 (MicroRNA 335) is a RNA Gene, and belongs to miRNA RNA class. Among its related pathways are MicroRNAs in cancer.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR335 Gene

Genomics for MIR335 Gene

Genomic Location for MIR335 Gene

Start:
130,496,111 bp from pter
End:
130,496,204 bp from pter
Size:
94 bases
Orientation:
Plus strand

Genomic View for MIR335 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR335 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR335 Gene

No data available for Regulatory Elements for MIR335 Gene

Proteins for MIR335 Gene

Post-translational modifications for MIR335 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR335 Gene

Domains for MIR335 Gene

Gene Families for MIR335 Gene

HGNC:
  • MIR :ncRNAs / Micro RNAs
genes like me logo Genes that share domains with MIR335: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for MIR335 Gene

Function for MIR335 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR335 Gene

Localization for MIR335 Gene

No data available for Gene Ontology (GO) - Cellular Components for MIR335 Gene

Pathways for MIR335 Gene

SuperPathways for MIR335 Gene

Superpath Contained pathways
1 MicroRNAs in cancer
genes like me logo Genes that share pathways with MIR335: view

Pathways by source for MIR335 Gene

1 KEGG pathway for MIR335 Gene

Interacting Proteins for MIR335 Gene

Gene Ontology (GO) - Biological Process for MIR335 Gene

None

Transcripts for MIR335 Gene

mRNA/cDNA for MIR335 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR335 Gene

No ASD Table

Relevant External Links for MIR335 Gene

GeneLoc Exon Structure for
MIR335
ECgene alternative splicing isoforms for
MIR335

Expression for MIR335 Gene

No Expression Related Data Available

Orthologs for MIR335 Gene

This gene was present in the common ancestor of mammals.

Orthologs for MIR335 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ptr-mir-335 37
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia bta-mir-335 37
  • 97 (a)
OneToOne
dog
(Canis familiaris)
Mammalia cfa-mir-335 37
  • 98 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Mir335 37
  • 87 (a)
OneToOne
Species with no ortholog for MIR335:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR335 Gene

ENSEMBL:
Gene Tree for MIR335 (if available)
TreeFam:
Gene Tree for MIR335 (if available)

Paralogs for MIR335 Gene

No data available for Paralogs for MIR335 Gene

Variants for MIR335 Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR335 Gene

Variant ID Type Subtype PubMed ID
nsv831130 CNV Loss 17160897
nsv831131 CNV Loss 17160897

Relevant External Links for MIR335 Gene

HapMap Linkage Disequilibrium report
MIR335

No data available for Sequence variations from dbSNP and Humsavar for MIR335 Gene

Disorders for MIR335 Gene

Relevant External Links for MIR335

Human Genome Epidemiology (HuGE) Navigator
MIR335
genes like me logo Genes that share disorders with MIR335: view

No data available for UniProtKB/Swiss-Prot for MIR335 Gene

Publications for MIR335 Gene

  1. Identification of many microRNAs that copurify with polyribosomes in mammalian neurons. (PMID: 14691248) Kim J. … Ruvkun G. (Proc. Natl. Acad. Sci. U.S.A. 2004) 3
  2. New human and mouse microRNA genes found by homology search. (PMID: 15634332) Weber M.J. (FEBS J. 2005) 3
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
  4. A mammalian microRNA expression atlas based on small RNA library sequencing. (PMID: 17604727) Landgraf P. … Tuschl T. (Cell 2007) 3
  5. Patterns of known and novel small RNAs in human cervical cancer. (PMID: 17616659) Lui W.O. … Fire A. (Cancer Res. 2007) 3

Products for MIR335 Gene

Sources for MIR335 Gene

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