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Aliases for MIR320E Gene

Subcategory (RNA class) for MIR320E Gene

miRNA

Quality Score for this RNA gene is

8

Aliases for MIR320E Gene

  • MicroRNA 320e 2 3
  • Hsa-Mir-320e 3

External Ids for MIR320E Gene

Previous GeneCards Identifiers for MIR320E Gene

  • GC19U901374
  • GC19M043637
  • GC19M047213

Summaries for MIR320E Gene

Entrez Gene Summary for MIR320E Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR320E Gene

MIR320E (MicroRNA 320e) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR320E Gene

Genomics for MIR320E Gene

Genomic Location for MIR320E Gene

Start:
46,709,271 bp from pter
End:
46,709,382 bp from pter
Size:
112 bases
Orientation:
Minus strand

Genomic View for MIR320E Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR320E Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR320E Gene

ORGUL Member Location for MIR320E Gene

ORGUL Member Location for MIR320E gene

No data available for Regulatory Elements for MIR320E Gene

Proteins for MIR320E Gene

Post-translational modifications for MIR320E Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR320E Gene

Domains for MIR320E Gene

Gene Families for MIR320E Gene

HGNC:
  • MIR :ncRNAs / Micro RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR320E: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR320E Gene

Function for MIR320E Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR320E Gene

Localization for MIR320E Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR320E Gene

Pathways for MIR320E Gene

SuperPathways for MIR320E Gene

No Data Available

Interacting Proteins for MIR320E Gene

Gene Ontology (GO) - Biological Process for MIR320E Gene

None

No data available for Pathways by source for MIR320E Gene

Transcripts for MIR320E Gene

mRNA/cDNA for MIR320E Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR320E Gene

No ASD Table

Relevant External Links for MIR320E Gene

GeneLoc Exon Structure for
MIR320E
ECgene alternative splicing isoforms for
MIR320E

Expression for MIR320E Gene

mRNA expression in normal human tissues for MIR320E Gene

genes like me logo Genes that share expressions with MIR320E: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for MIR320E Gene

Orthologs for MIR320E Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for MIR320E Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ptr-mir-320e 36
  • 100 (a)
OneToOne
Species with no ortholog for MIR320E:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR320E Gene

ENSEMBL:
Gene Tree for MIR320E (if available)
TreeFam:
Gene Tree for MIR320E (if available)

Paralogs for MIR320E Gene

No data available for Paralogs for MIR320E Gene

Variants for MIR320E Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR320E Gene

Variant ID Type Subtype PubMed ID
dgv3961n71 CNV Loss 21882294
nsv912189 CNV Loss 21882294
nsv833850 CNV Loss 17160897

Relevant External Links for MIR320E Gene

HapMap Linkage Disequilibrium report
MIR320E

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for MIR320E Gene

Disorders for MIR320E Gene

No disorders were found for MIR320E Gene.

No data available for UniProtKB/Swiss-Prot for MIR320E Gene

Publications for MIR320E Gene

  1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
  2. Ago2 immunoprecipitation identifies predicted microRNAs in human embryonic stem cells and neural precursors. (PMID: 19784364) Goff L.A. … Hart R.P. (PLoS ONE 2009) 3
  3. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark M.S. … Hayward N.K. (PLoS ONE 2010) 3

Products for MIR320E Gene

Sources for MIR320E Gene

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