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Aliases for MIR3201 Gene

Subcategory (RNA class) for MIR3201 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3201 Gene

  • MicroRNA 3201 2 3 5
  • Hsa-Mir-3201 3

External Ids for MIR3201 Gene

Previous GeneCards Identifiers for MIR3201 Gene

  • GC22U900676
  • GC22P048670

Summaries for MIR3201 Gene

Entrez Gene Summary for MIR3201 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3201 Gene

MIR3201 (MicroRNA 3201) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3201 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3201 Gene

Genomics for MIR3201 Gene

Regulatory Elements for MIR3201 Gene

Enhancers for MIR3201 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH22H048276 0.5 ENCODE 0.7 +3.5 3522 2 ZFHX2 PRDM6 ZNF341 GLIS1 EGR2 MIR3201 GC22M048285
GH22H048288 0.2 ENCODE 0.4 +14.4 14360 0 GC22M048285 MIR3201
GH22H048289 0.2 ENCODE 0.4 +14.1 14120 0 GC22M048285 MIR3201
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR3201 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR3201 Gene

Chromosome:
22
Start:
48,274,364 bp from pter
End:
48,274,415 bp from pter
Size:
52 bases
Orientation:
Plus strand

Genomic View for MIR3201 Gene

Genes around MIR3201 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3201 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3201 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3201 Gene

Proteins for MIR3201 Gene

Post-translational modifications for MIR3201 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3201 Gene

Domains & Families for MIR3201 Gene

Gene Families for MIR3201 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3201: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3201 Gene

Function for MIR3201 Gene

Phenotypes From GWAS Catalog for MIR3201 Gene

Animal Model Products

CRISPR Products

miRNA Products

Clone Products

  • Applied Biological Materials Clones for MIR3201
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3201 Gene

Localization for MIR3201 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3201 Gene

Pathways & Interactions for MIR3201 Gene

SuperPathways for MIR3201 Gene

No Data Available

Interacting Proteins for MIR3201 Gene

Gene Ontology (GO) - Biological Process for MIR3201 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3201 Gene

Drugs & Compounds for MIR3201 Gene

No Compound Related Data Available

Transcripts for MIR3201 Gene

mRNA/cDNA for MIR3201 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

miRNA Products

Clone Products

  • Applied Biological Materials Clones for MIR3201
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3201 Gene

No ASD Table

Relevant External Links for MIR3201 Gene

GeneLoc Exon Structure for
MIR3201
ECgene alternative splicing isoforms for
MIR3201

Expression for MIR3201 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3201 Gene:

MIR3201
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3201 Gene

Orthologs for MIR3201 Gene

Evolution for MIR3201 Gene

ENSEMBL:
Gene Tree for MIR3201 (if available)
TreeFam:
Gene Tree for MIR3201 (if available)

No data available for Orthologs for MIR3201 Gene

Paralogs for MIR3201 Gene

No data available for Paralogs for MIR3201 Gene

Variants for MIR3201 Gene

Sequence variations from dbSNP and Humsavar for MIR3201 Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type
rs1000022358 -- 48,273,523(+) TTTTC(A/G)GTACT upstream-variant-2KB
rs1000054842 -- 48,273,270(+) TTTGT(C/T)TTTTA upstream-variant-2KB
rs1000968723 -- 48,273,302(+) ATAAT(A/C)AATCG upstream-variant-2KB
rs1001080994 -- 48,272,578(+) AATGG(G/T)GAGGG upstream-variant-2KB
rs1002043657 -- 48,272,870(+) GCCAG(C/T)AGGTG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR3201 Gene

Variant ID Type Subtype PubMed ID
nsv834231 CNV gain 17160897

Relevant External Links for MIR3201 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3201

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3201 Gene

Disorders for MIR3201 Gene

Relevant External Links for MIR3201

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR3201

No disorders were found for MIR3201 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3201 Gene

Publications for MIR3201 Gene

  1. A functional variant in APOA5/A4/C3/A1 gene cluster contributes to elevated triglycerides and severity of CAD by interfering with microRNA 3201 binding efficiency. (PMID: 25034063) Cui G … Wang DW (Journal of the American College of Cardiology 2014) 3 60
  2. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark MS … Hayward NK (PloS one 2010) 3 60
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 60

Products for MIR3201 Gene

Sources for MIR3201 Gene

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