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Aliases for MIR3198-1 Gene

Subcategory (RNA class) for MIR3198-1 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3198-1 Gene

  • MicroRNA 3198-1 2 3
  • MicroRNA 3198 2 3
  • Hsa-Mir-3198-1 3
  • Hsa-Mir-3198 3
  • MIR3198 3

External Ids for MIR3198-1 Gene

Previous HGNC Symbols for MIR3198-1 Gene

  • MIR3198

Previous GeneCards Identifiers for MIR3198-1 Gene

  • GC22M018247

Summaries for MIR3198-1 Gene

Entrez Gene Summary for MIR3198-1 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3198-1 Gene

MIR3198-1 (MicroRNA 3198-1) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3198-1 Gene

Genomics for MIR3198-1 Gene

Genomic Location for MIR3198-1 Gene

Start:
17,764,180 bp from pter
End:
17,764,259 bp from pter
Size:
80 bases
Orientation:
Minus strand

Genomic View for MIR3198-1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR3198-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3198-1 Gene

No data available for Regulatory Elements for MIR3198-1 Gene

Proteins for MIR3198-1 Gene

Post-translational modifications for MIR3198-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3198-1 Gene

Domains for MIR3198-1 Gene

Gene Families for MIR3198-1 Gene

HGNC:
  • MIR :ncRNAs / Micro RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3198-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3198-1 Gene

Function for MIR3198-1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR3198-1 Gene

Localization for MIR3198-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3198-1 Gene

Pathways for MIR3198-1 Gene

SuperPathways for MIR3198-1 Gene

No Data Available

Interacting Proteins for MIR3198-1 Gene

Gene Ontology (GO) - Biological Process for MIR3198-1 Gene

None

No data available for Pathways by source for MIR3198-1 Gene

Transcripts for MIR3198-1 Gene

mRNA/cDNA for MIR3198-1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate MIR3198-1
    • Block miRNA regulation of MIR3198-1 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for MIR3198-1

    Primer Products

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for MIR3198-1 Gene

    No ASD Table

    Relevant External Links for MIR3198-1 Gene

    GeneLoc Exon Structure for
    MIR3198-1
    ECgene alternative splicing isoforms for
    MIR3198-1

    Expression for MIR3198-1 Gene

    mRNA expression in normal human tissues for MIR3198-1 Gene

    genes like me logo Genes that share expressions with MIR3198-1: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for MIR3198-1 Gene

    Orthologs for MIR3198-1 Gene

    Evolution for MIR3198-1 Gene

    ENSEMBL:
    Gene Tree for MIR3198-1 (if available)
    TreeFam:
    Gene Tree for MIR3198-1 (if available)

    No data available for Orthologs for MIR3198-1 Gene

    Paralogs for MIR3198-1 Gene

    No data available for Paralogs for MIR3198-1 Gene

    Variants for MIR3198-1 Gene

    Structural Variations from Database of Genomic Variants (DGV) for MIR3198-1 Gene

    Variant ID Type Subtype PubMed ID
    nsv526826 CNV Gain 19592680
    nsv428385 CNV Gain+Loss 18775914
    nsv914151 CNV Gain 21882294
    nsv914152 CNV Loss 21882294
    nsv834119 CNV Loss 17160897
    nsv834120 CNV Loss 17160897

    Relevant External Links for MIR3198-1 Gene

    HapMap Linkage Disequilibrium report
    MIR3198-1

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for MIR3198-1 Gene

    Disorders for MIR3198-1 Gene

    No disorders were found for MIR3198-1 Gene.

    No data available for UniProtKB/Swiss-Prot for MIR3198-1 Gene

    Publications for MIR3198-1 Gene

    1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
    2. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark M.S. … Hayward N.K. (PLoS ONE 2010) 3
    3. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H. … Rovira C. (Cancer Res. 2011) 3

    Products for MIR3198-1 Gene

    Sources for MIR3198-1 Gene

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