Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MIR3194 Gene

Subcategory (RNA class) for MIR3194 Gene

miRNA

Quality Score for this RNA gene is

8

Aliases for MIR3194 Gene

  • MicroRNA 3194 2 3 5
  • Hsa-Mir-3194 3
  • Mir-3194 3

External Ids for MIR3194 Gene

Previous GeneCards Identifiers for MIR3194 Gene

  • GC20U900564
  • GC20M050069

Summaries for MIR3194 Gene

Entrez Gene Summary for MIR3194 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3194 Gene

MIR3194 (MicroRNA 3194) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3194 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3194 Gene

Genomics for MIR3194 Gene

Regulatory Elements for MIR3194 Gene

Enhancers for MIR3194 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20H051444 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +4.9 4943 7 PKNOX1 ARID4B SIN3A ZBTB7B ZNF121 SLC30A9 GLIS2 FOS PPARG SMARCB1 NFATC2 PSMD10P1 MIR3194 GC20M051426
GH20H051456 1.5 Ensembl ENCODE dbSUPER 0.7 -4.3 -4258 2 PKNOX1 SIN3A FEZF1 ZBTB7B GLIS2 FOS DEK ZNF202 SP3 SP5 ADNP PSMD10P1 DPM1 ZFP64 NFATC2 MOCS3 MIR3194 GC20M051470
GH20H051436 1 ENCODE dbSUPER 0.4 +15.4 15375 1 BCOR BACH1 BATF FOSL1 ZNF316 DIDO1 FOXK2 ZNF239 FOS NFE2 NFATC2 GC20M051426 MIR3194
GH20H051460 0.9 ENCODE 0.4 -8.2 -8198 1 PKNOX1 TBL1XR1 NFIB RB1 BMI1 BATF RFX5 SCRT2 ZNF143 ATF7 NFATC2 MIR3194 GC20M051470
GH20H051462 0.7 Ensembl ENCODE 0.4 -10.1 -10088 0 ZNF341 ZNF600 ZIC2 NFATC2 GC20M051470 MIR3194
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR3194 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR3194 Gene

Chromosome:
20
Start:
51,452,905 bp from pter
End:
51,452,977 bp from pter
Size:
73 bases
Orientation:
Minus strand

Genomic View for MIR3194 Gene

Genes around MIR3194 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3194 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3194 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3194 Gene

ORGUL Member Location for MIR3194 Gene

ORGUL Member Location for MIR3194 gene

Proteins for MIR3194 Gene

Post-translational modifications for MIR3194 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3194 Gene

Domains & Families for MIR3194 Gene

Gene Families for MIR3194 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3194: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3194 Gene

Function for MIR3194 Gene

Phenotypes From GWAS Catalog for MIR3194 Gene

Animal Model Products

CRISPR Products

miRNA Products

Clone Products

  • Applied Biological Materials Clones for MIR3194
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3194 Gene

Localization for MIR3194 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3194 Gene

Pathways & Interactions for MIR3194 Gene

SuperPathways for MIR3194 Gene

No Data Available

Interacting Proteins for MIR3194 Gene

Gene Ontology (GO) - Biological Process for MIR3194 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3194 Gene

Drugs & Compounds for MIR3194 Gene

No Compound Related Data Available

Transcripts for MIR3194 Gene

mRNA/cDNA for MIR3194 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

miRNA Products

Clone Products

  • Applied Biological Materials Clones for MIR3194
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3194 Gene

No ASD Table

Relevant External Links for MIR3194 Gene

GeneLoc Exon Structure for
MIR3194
ECgene alternative splicing isoforms for
MIR3194

Expression for MIR3194 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3194 Gene:

MIR3194
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3194 Gene

Orthologs for MIR3194 Gene

Evolution for MIR3194 Gene

ENSEMBL:
Gene Tree for MIR3194 (if available)
TreeFam:
Gene Tree for MIR3194 (if available)

No data available for Orthologs for MIR3194 Gene

Paralogs for MIR3194 Gene

No data available for Paralogs for MIR3194 Gene

Variants for MIR3194 Gene

Sequence variations from dbSNP and Humsavar for MIR3194 Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type
rs1000244849 -- 51,453,534(+) GTTAT(C/T)TGAGC intron-variant, upstream-variant-2KB
rs1000784088 -- 51,453,184(+) AATGC(A/C)GTTGT intron-variant, upstream-variant-2KB
rs1002324297 -- 51,453,037(+) GCCTT(C/T)TAAAC intron-variant, upstream-variant-2KB
rs1005234922 -- 51,454,261(+) TAAAA(A/T)TTTCC intron-variant, upstream-variant-2KB
rs1005578977 -- 51,454,914(+) CATTT(C/T)GTTTT intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR3194 Gene

Variant ID Type Subtype PubMed ID
esv2751917 CNV gain 17911159

Relevant External Links for MIR3194 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3194

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3194 Gene

Disorders for MIR3194 Gene

Relevant External Links for MIR3194

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR3194

No disorders were found for MIR3194 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3194 Gene

Publications for MIR3194 Gene

  1. Cross-disorder genome-wide analyses suggest a complex genetic relationship between Tourette's syndrome and OCD. (PMID: 25158072) Yu D … Pauls DL (The American journal of psychiatry 2015) 3 60
  2. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 3 60
  3. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H … Rovira C (Cancer research 2011) 3 60
  4. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark MS … Hayward NK (PloS one 2010) 3 60
  5. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 60

Products for MIR3194 Gene

Sources for MIR3194 Gene

Content
Loading form....