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Aliases for MIR3178 Gene

Subcategory (RNA class) for MIR3178 Gene


Quality Score for this RNA gene is


Aliases for MIR3178 Gene

  • MicroRNA 3178 2 3 5
  • Hsa-Mir-3178 3
  • Mir-3178 3

External Ids for MIR3178 Gene

Previous GeneCards Identifiers for MIR3178 Gene

  • GC16U901252
  • GC16M002581

Summaries for MIR3178 Gene

Entrez Gene Summary for MIR3178 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3178 Gene

MIR3178 (MicroRNA 3178) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3178 Gene

Genomics for MIR3178 Gene

Regulatory Elements for MIR3178 Gene

Enhancers for MIR3178 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16F002534 0.4 ENCODE 0.8 -4.9 -4911 3.8 PKNOX1 ARID4B SIN3A ZNF48 YY1 GTF3C2 GLIS2 ELK1 FOS PAF1 HN1L ZNF598 TRAF7 ENSG00000260954 ENSG00000255513 THOC6 SNORA64 LOC105371055 RNPS1 SNORD60
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MIR3178 on UCSC Golden Path with GeneCards custom track

Promoters for MIR3178 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001631285 -495 1801 HDGF ARID4B SIN3A FEZF1 DMAP1 ZNF2 PAF1 ZNF263 SP3 SP5

Genomic Location for MIR3178 Gene

2,531,922 bp from pter
2,532,005 bp from pter
84 bases
Minus strand

Genomic View for MIR3178 Gene

Genes around MIR3178 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3178 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3178 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3178 Gene

Proteins for MIR3178 Gene

Post-translational modifications for MIR3178 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3178 Gene

Domains & Families for MIR3178 Gene

Gene Families for MIR3178 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3178: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3178 Gene

Function for MIR3178 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3178 Gene

Localization for MIR3178 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3178 Gene

Pathways & Interactions for MIR3178 Gene

SuperPathways for MIR3178 Gene

No Data Available

Interacting Proteins for MIR3178 Gene

Gene Ontology (GO) - Biological Process for MIR3178 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR3178 Gene

Transcripts for MIR3178 Gene

mRNA/cDNA for MIR3178 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3178 Gene

No ASD Table

Relevant External Links for MIR3178 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR3178 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR3178 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3178 Gene:

genes like me logo Genes that share expression patterns with MIR3178: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR3178 Gene

Orthologs for MIR3178 Gene

Evolution for MIR3178 Gene

Gene Tree for MIR3178 (if available)
Gene Tree for MIR3178 (if available)

No data available for Orthologs for MIR3178 Gene

Paralogs for MIR3178 Gene

No data available for Paralogs for MIR3178 Gene

Variants for MIR3178 Gene

Sequence variations from dbSNP and Humsavar for MIR3178 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type
rs111740173 -- 2,533,503(+) GTCTC(C/G)AACTC upstream-variant-2KB
rs112585913 -- 2,532,247(+) CCCCC(-/A)CCCAT upstream-variant-2KB
rs112600058 -- 2,533,606(+) TTTTT(G/T)GAGAC upstream-variant-2KB
rs113277393 -- 2,531,453(+) CACTG(-/C)TTTGT downstream-variant-500B, upstream-variant-2KB
rs113524253 -- 2,532,354(+) GCCCT(-/CA)CATTC upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR3178 Gene

Variant ID Type Subtype PubMed ID
esv2422427 CNV duplication 17116639
esv2760067 CNV gain+loss 17122850
nsv1052260 CNV gain 25217958
nsv833122 CNV loss 17160897

Relevant External Links for MIR3178 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3178 Gene

Disorders for MIR3178 Gene

Relevant External Links for MIR3178

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR3178 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3178 Gene

Publications for MIR3178 Gene

  1. Regulation of tumorigenesis and metastasis of hepatocellular carcinoma tumor endothelial cells by microRNA-3178 and underlying mechanism. (PMID: 26182877) Li W. … Yan R. (Biochem. Biophys. Res. Commun. 2015) 3 64
  2. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 3 64
  3. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark M.S. … Hayward N.K. (PLoS ONE 2010) 3 64
  4. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR3178 Gene

Sources for MIR3178 Gene

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