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Aliases for MIR3178 Gene

Subcategory (RNA class) for MIR3178 Gene


Quality Score for this RNA gene is


Aliases for MIR3178 Gene

  • MicroRNA 3178 2 3 5
  • Hsa-Mir-3178 3
  • Mir-3178 3

External Ids for MIR3178 Gene

Previous GeneCards Identifiers for MIR3178 Gene

  • GC16U901252
  • GC16M002581

Summaries for MIR3178 Gene

Entrez Gene Summary for MIR3178 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3178 Gene

MIR3178 (MicroRNA 3178) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3178 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3178 Gene

Genomics for MIR3178 Gene

GeneHancer (GH) Regulatory Elements for MIR3178 Gene

Promoters and enhancers for MIR3178 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16I002529 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE 550.8 +0.2 159 3.8 HDGF ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 POLR2B ZNF207 ZNF143 CEMP1 GC16P002995 MIR3178 TBC1D24 LOC652276 ATP6V0C PDPK1 AMDHD2 SRRM2 E4F1
GH16I002534 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.8 -5.0 -4993 4 HDGF PKNOX1 ARID4B SIN3A ZNF48 YY1 GTF3C2 GLIS2 FOS PAF1 PDPK1 ZNF213-AS1 CRAMP1 ZNF75A TBL3 ZNF597 LOC106660606 RNPS1 TSC2 AMDHD2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR3178 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR3178 Gene

Genomic Locations for MIR3178 Gene
84 bases
Minus strand

Genomic View for MIR3178 Gene

Genes around MIR3178 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3178 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3178 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3178 Gene

Proteins for MIR3178 Gene

Post-translational modifications for MIR3178 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3178 Gene

Domains & Families for MIR3178 Gene

Gene Families for MIR3178 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3178: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3178 Gene

Function for MIR3178 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3178 Gene

Localization for MIR3178 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3178 Gene

Pathways & Interactions for MIR3178 Gene

SuperPathways for MIR3178 Gene

No Data Available

Interacting Proteins for MIR3178 Gene

Gene Ontology (GO) - Biological Process for MIR3178 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR3178 Gene

Drugs & Compounds for MIR3178 Gene

No Compound Related Data Available

Transcripts for MIR3178 Gene

mRNA/cDNA for MIR3178 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3178 Gene

No ASD Table

Relevant External Links for MIR3178 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR3178 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR3178 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3178 Gene:

genes like me logo Genes that share expression patterns with MIR3178: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3178 Gene

Orthologs for MIR3178 Gene

Evolution for MIR3178 Gene

Gene Tree for MIR3178 (if available)
Gene Tree for MIR3178 (if available)

No data available for Orthologs for MIR3178 Gene

Paralogs for MIR3178 Gene

No data available for Paralogs for MIR3178 Gene

Variants for MIR3178 Gene

Sequence variations from dbSNP and Humsavar for MIR3178 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000260221 -- 2,532,925(-) T/C upstream_transcript_variant
rs1000354027 -- 2,532,800(-) T/G upstream_transcript_variant
rs1000362781 -- 2,532,354(-) C/T upstream_transcript_variant
rs1000966593 -- 2,533,581(-) TTTTTTTT/TTTTTTTTT/TTTTTTTTTT upstream_transcript_variant
rs1001137527 -- 2,533,095(-) C/A/G/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR3178 Gene

Variant ID Type Subtype PubMed ID
esv2422427 CNV duplication 17116639
esv2760067 CNV gain+loss 17122850
nsv1052260 CNV gain 25217958
nsv833122 CNV loss 17160897

Additional Variant Information for MIR3178 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3178 Gene

Disorders for MIR3178 Gene

Additional Disease Information for MIR3178

No disorders were found for MIR3178 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3178 Gene

Publications for MIR3178 Gene

  1. MicroRNA-3178 ameliorates inflammation and gastric carcinogenesis promoted by Helicobacter pylori new toxin, Tip-α, by targeting TRAF3. (PMID: 27493095) Zou M … Cheng W (Helicobacter 2017) 3 58
  2. Regulation of tumorigenesis and metastasis of hepatocellular carcinoma tumor endothelial cells by microRNA-3178 and underlying mechanism. (PMID: 26182877) Li W … Yan R (Biochemical and biophysical research communications 2015) 3 58
  3. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 3 58
  4. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark MS … Hayward NK (PloS one 2010) 3 58
  5. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR3178 Gene

Sources for MIR3178 Gene

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