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Aliases for MIR3176 Gene

Subcategory (RNA class) for MIR3176 Gene


Quality Score for this RNA gene is


Aliases for MIR3176 Gene

  • MicroRNA 3176 2 3 5
  • Hsa-Mir-3176 3
  • Mir-3176 3

External Ids for MIR3176 Gene

Previous GeneCards Identifiers for MIR3176 Gene

  • GC16U901202
  • GC16P000597
  • GC16P000598

Summaries for MIR3176 Gene

Entrez Gene Summary for MIR3176 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3176 Gene

MIR3176 (MicroRNA 3176) is an RNA Gene, and is affiliated with the miRNA class. Among its related pathways are Respiratory electron transport, ATP synthesis by chemiosmotic coupling, and heat production by uncoupling proteins..

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3176 Gene

Genomics for MIR3176 Gene

Regulatory Elements for MIR3176 Gene

Enhancers for MIR3176 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16G000539 1.1 ENCODE 0.7 -2.9 -2865 2.6 HDGF PKNOX1 CREB3L1 AGO1 ARID4B SIN3A DMAP1 YY1 ZNF766 ZNF143 ENSG00000261505 ENSG00000260051 CAPN15 PRR35 PIGQ NHLRC4 RHOT2 WASH4P JMJD8 LOC105371038
GH16G000542 1 ENCODE 0.7 +0.3 307 2.0 HNRNPUL1 PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF48 ZNF2 GLIS2 FOS NME4 NPRL3 MIR3176 ENSG00000261691
GH16G000546 1 Ensembl ENCODE 0.4 +5.2 5191 4.2 CTCF HINFP NFXL1 BCL11B RAD21 HIC1 SCRT2 SMC3 KLF8 SCRT1 SNRNP25 MIR3176 ENSG00000261691
GH16G000536 0.8 dbSUPER 0.4 -6.1 -6090 1.1 KLF1 NFIB AGO1 ZNF48 ZNF2 ZBTB48 POLR2A SCRT2 PATZ1 PCBP1 CAPN15 PRR35 NHLRC4 PIGQ TPSB2 MIR5587 MIR3176
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR3176 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR3176 Gene

543,277 bp from pter
543,366 bp from pter
90 bases
Plus strand

Genomic View for MIR3176 Gene

Genes around MIR3176 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3176 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3176 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3176 Gene

Proteins for MIR3176 Gene

Post-translational modifications for MIR3176 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3176 Gene

Domains & Families for MIR3176 Gene

Gene Families for MIR3176 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3176: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3176 Gene

Function for MIR3176 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3176 Gene

Localization for MIR3176 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3176 Gene

Pathways & Interactions for MIR3176 Gene

genes like me logo Genes that share pathways with MIR3176: view

Pathways by source for MIR3176 Gene

1 BioSystems pathway for MIR3176 Gene

Interacting Proteins for MIR3176 Gene

Gene Ontology (GO) - Biological Process for MIR3176 Gene


No data available for SIGNOR curated interactions for MIR3176 Gene

Drugs & Compounds for MIR3176 Gene

No Compound Related Data Available

Transcripts for MIR3176 Gene

mRNA/cDNA for MIR3176 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3176 Gene

No ASD Table

Relevant External Links for MIR3176 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR3176 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR3176 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3176 Gene:

genes like me logo Genes that share expression patterns with MIR3176: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3176 Gene

Orthologs for MIR3176 Gene

Evolution for MIR3176 Gene

Gene Tree for MIR3176 (if available)
Gene Tree for MIR3176 (if available)

No data available for Orthologs for MIR3176 Gene

Paralogs for MIR3176 Gene

No data available for Paralogs for MIR3176 Gene

Variants for MIR3176 Gene

Sequence variations from dbSNP and Humsavar for MIR3176 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type
rs1000534449 -- 541,283(+) TGCAG(A/G)GGATT intron-variant, upstream-variant-2KB
rs1001367591 -- 541,682(+) CAGCC(A/G)TCATT intron-variant, upstream-variant-2KB
rs1002819212 -- 543,426(+) GTGCC(A/C/G)GGTAT intron-variant, downstream-variant-500B
rs1003021213 -- 543,785(+) GCGCC(-/G)GGACT intron-variant, downstream-variant-500B
rs1003472532 -- 543,328(+) GGGAT(C/T)CCCAG intron-variant, nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for MIR3176 Gene

Variant ID Type Subtype PubMed ID
esv2422427 CNV duplication 17116639
nsv1054426 CNV gain 25217958
nsv1160325 CNV duplication 26073780
nsv471063 CNV loss 18288195
nsv471064 CNV gain 18288195
nsv526903 CNV loss 19592680
nsv528354 CNV loss 19592680
nsv570986 CNV loss 21841781
nsv833113 CNV loss 17160897
nsv833114 CNV gain+loss 17160897
nsv952898 CNV deletion 24416366

Relevant External Links for MIR3176 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3176 Gene

Disorders for MIR3176 Gene

Relevant External Links for MIR3176

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR3176 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3176 Gene

Publications for MIR3176 Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 3 64
  2. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H. … Rovira C. (Cancer Res. 2011) 3 64
  3. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark M.S. … Hayward N.K. (PLoS ONE 2010) 3 64
  4. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR3176 Gene

Sources for MIR3176 Gene

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