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Aliases for MIR3176 Gene

Subcategory (RNA class) for MIR3176 Gene


Quality Score for this RNA gene is


Aliases for MIR3176 Gene

  • MicroRNA 3176 2 3 5
  • Hsa-Mir-3176 3
  • Mir-3176 3

External Ids for MIR3176 Gene

Previous GeneCards Identifiers for MIR3176 Gene

  • GC16U901202
  • GC16P000597
  • GC16P000598

Summaries for MIR3176 Gene

Entrez Gene Summary for MIR3176 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3176 Gene

MIR3176 (MicroRNA 3176) is an RNA Gene, and is affiliated with the miRNA class. Among its related pathways are Respiratory electron transport, ATP synthesis by chemiosmotic coupling, and heat production by uncoupling proteins..

Additional gene information for MIR3176 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3176 Gene

Genomics for MIR3176 Gene

GeneHancer (GH) Regulatory Elements for MIR3176 Gene

Promoters and enhancers for MIR3176 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16I000542 Enhancer 0.8 ENCODE 550.8 +0.3 306 2 MLX ARID4B DMAP1 RARA ETS1 GLIS2 EGR1 CREM THAP11 GMEB2 MIR3176 NME4 NPRL3 ENSG00000261691 CAPN15
GH16I000546 Promoter/Enhancer 1.4 EPDnew Ensembl ENCODE 0.4 +5.2 5190 4.2 CTCF NFXL1 RAD21 BCL11B HIC1 POLR2A VEZF1 SCRT2 ZNF143 KLF8 CAPN15 SNRNP25 ENSG00000261691 MIR3176
GH16I000539 Enhancer 0.4 ENCODE 0.8 -2.9 -2865 2.6 POLR2A FOS ZIC2 PRR35 NHLRC4 PIGQ CAPN15 METTL26 MIR3176 MIR5587
GH16I000536 Enhancer 0.4 dbSUPER 0.4 -6.1 -6090 1.1 CTCF KLF1 MIR5587 CAPN15 PRR35 NHLRC4 PIGQ TPSB2 MIR3176
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR3176 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR3176 Gene

Genomic Locations for MIR3176 Gene
90 bases
Plus strand

Genomic View for MIR3176 Gene

Genes around MIR3176 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3176 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3176 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3176 Gene

Proteins for MIR3176 Gene

Post-translational modifications for MIR3176 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3176 Gene

Domains & Families for MIR3176 Gene

Gene Families for MIR3176 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3176: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3176 Gene

Function for MIR3176 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3176 Gene

Localization for MIR3176 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3176 Gene

Pathways & Interactions for MIR3176 Gene

genes like me logo Genes that share pathways with MIR3176: view

Pathways by source for MIR3176 Gene

1 BioSystems pathway for MIR3176 Gene

Interacting Proteins for MIR3176 Gene

Gene Ontology (GO) - Biological Process for MIR3176 Gene


No data available for SIGNOR curated interactions for MIR3176 Gene

Drugs & Compounds for MIR3176 Gene

No Compound Related Data Available

Transcripts for MIR3176 Gene

mRNA/cDNA for MIR3176 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3176 Gene

No ASD Table

Relevant External Links for MIR3176 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR3176 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR3176 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3176 Gene:

genes like me logo Genes that share expression patterns with MIR3176: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3176 Gene

Orthologs for MIR3176 Gene

Evolution for MIR3176 Gene

Gene Tree for MIR3176 (if available)
Gene Tree for MIR3176 (if available)

No data available for Orthologs for MIR3176 Gene

Paralogs for MIR3176 Gene

No data available for Paralogs for MIR3176 Gene

Variants for MIR3176 Gene

Sequence variations from dbSNP and Humsavar for MIR3176 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000534449 -- 541,283(+) G/A upstream_transcript_variant
rs1001367591 -- 541,682(+) G/A upstream_transcript_variant
rs1002819212 -- 543,426(+) G/A/C downstream_transcript_variant
rs1003021213 -- 543,785(+) GGG/GG downstream_transcript_variant
rs1003472532 -- 543,328(+) C/T non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR3176 Gene

Variant ID Type Subtype PubMed ID
esv2422427 CNV duplication 17116639
nsv1054426 CNV gain 25217958
nsv1160325 CNV duplication 26073780
nsv471063 CNV loss 18288195
nsv471064 CNV gain 18288195
nsv526903 CNV loss 19592680
nsv528354 CNV loss 19592680
nsv570986 CNV loss 21841781
nsv833113 CNV loss 17160897
nsv833114 CNV gain+loss 17160897
nsv952898 CNV deletion 24416366

Additional Variant Information for MIR3176 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3176 Gene

Disorders for MIR3176 Gene

Additional Disease Information for MIR3176

No disorders were found for MIR3176 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3176 Gene

Publications for MIR3176 Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 3 58
  2. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H … Rovira C (Cancer research 2011) 3 58
  3. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark MS … Hayward NK (PloS one 2010) 3 58
  4. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR3176 Gene

Sources for MIR3176 Gene

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