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Aliases for MIR3174 Gene

Subcategory (RNA class) for MIR3174 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3174 Gene

  • MicroRNA 3174 2 3 5
  • Hsa-Mir-3174 3

External Ids for MIR3174 Gene

Previous GeneCards Identifiers for MIR3174 Gene

  • GC15U901281
  • GC15P090549

Summaries for MIR3174 Gene

Entrez Gene Summary for MIR3174 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3174 Gene

MIR3174 (MicroRNA 3174) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3174 Gene

Genomics for MIR3174 Gene

Regulatory Elements for MIR3174 Gene

Enhancers for MIR3174 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15F090008 1.3 Ensembl ENCODE 0.8 +2.9 2946 1.8 CTCF CEBPB YY1 JUND ZFHX2 IKZF1 ADNP FOS SPI1 ARPIN MIR3174 ENSG00000273691
GH15F089997 0.8 FANTOM5 ENCODE 0.8 -4.7 -4652 8.4 PKNOX1 ARNT MLX ARID4B SIN3A DMAP1 ZNF2 ZNF143 ZNF207 FOS POLG LOC100631255 ZNF710 IQGAP1 ARPIN ANPEP MIR3174
GH15F090006 1.2 ENCODE 0.8 -0.4 -375 0.1 SP7 ZBTB20 MIR3174 ZNF710
GH15F090012 1.4 Ensembl ENCODE 0.4 +6.7 6746 2.2 HDGF PKNOX1 RAD21 YY1 ZFHX2 POLR2A HNF4G ZNF600 FOS RFX1 LOC100631255 ENSG00000259314 POLG ENSG00000259212 NGRN MIR3174 ENSG00000273691
GH15F090015 1.3 FANTOM5 Ensembl ENCODE 0.4 +11.6 11646 6.4 SIN3A ZNF48 YY1 GATA2 KLF7 FOS DEK JUNB PPARG NFIL3 IQGAP1 ZNF710 MESP1 ANPEP CIB1 AP3S2 ENSG00000273691 MIR3174
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MIR3174 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR3174 Gene

Chromosome:
15
Start:
90,006,755 bp from pter
End:
90,006,841 bp from pter
Size:
87 bases
Orientation:
Plus strand

Genomic View for MIR3174 Gene

Genes around MIR3174 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3174 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3174 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3174 Gene

Proteins for MIR3174 Gene

Post-translational modifications for MIR3174 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3174 Gene

Domains & Families for MIR3174 Gene

Gene Families for MIR3174 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3174: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3174 Gene

Function for MIR3174 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3174 Gene

Localization for MIR3174 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3174 Gene

Pathways & Interactions for MIR3174 Gene

SuperPathways for MIR3174 Gene

No Data Available

Interacting Proteins for MIR3174 Gene

Gene Ontology (GO) - Biological Process for MIR3174 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3174 Gene

Transcripts for MIR3174 Gene

mRNA/cDNA for MIR3174 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3174 Gene

No ASD Table

Relevant External Links for MIR3174 Gene

GeneLoc Exon Structure for
MIR3174
ECgene alternative splicing isoforms for
MIR3174

Expression for MIR3174 Gene

mRNA expression in normal human tissues for MIR3174 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3174 Gene:

MIR3174
genes like me logo Genes that share expression patterns with MIR3174: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR3174 Gene

Orthologs for MIR3174 Gene

Evolution for MIR3174 Gene

ENSEMBL:
Gene Tree for MIR3174 (if available)
TreeFam:
Gene Tree for MIR3174 (if available)

No data available for Orthologs for MIR3174 Gene

Paralogs for MIR3174 Gene

No data available for Paralogs for MIR3174 Gene

Variants for MIR3174 Gene

Sequence variations from dbSNP and Humsavar for MIR3174 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs111934210 -- 90,006,271(+) TTCAG(C/G)TTAAA intron-variant, upstream-variant-2KB
rs112462514 -- 90,006,745(+) TGGAC(C/G)AGCAT intron-variant, upstream-variant-2KB
rs113446823 -- 90,005,822(+) AATTA(C/T)GCTAC intron-variant, upstream-variant-2KB
rs117794318 -- 90,007,265(+) TAAAA(C/T)GGGGA intron-variant, downstream-variant-500B
rs12324347 -- 90,005,639(+) gagac(A/G)gggtt intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR3174 Gene

Variant ID Type Subtype PubMed ID
esv997696 CNV deletion 20482838

Relevant External Links for MIR3174 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3174

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3174 Gene

Disorders for MIR3174 Gene

Relevant External Links for MIR3174

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR3174

No disorders were found for MIR3174 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3174 Gene

Publications for MIR3174 Gene

  1. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark M.S. … Hayward N.K. (PLoS ONE 2010) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR3174 Gene

Sources for MIR3174 Gene

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