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Aliases for MIR3168 Gene

Subcategory (RNA class) for MIR3168 Gene

miRNA

Quality Score for this RNA gene is

8

Aliases for MIR3168 Gene

  • MicroRNA 3168 2 3 5
  • Hsa-Mir-3168 3

External Ids for MIR3168 Gene

Previous GeneCards Identifiers for MIR3168 Gene

  • GC13U900768
  • GC13M041675

Summaries for MIR3168 Gene

Entrez Gene Summary for MIR3168 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3168 Gene

MIR3168 (MicroRNA 3168) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3168 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3168 Gene

Genomics for MIR3168 Gene

GeneHancer (GH) Regulatory Elements for MIR3168 Gene

Promoters and enhancers for MIR3168 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13I041107 Enhancer 0.5 ENCODE 0.4 -6.8 -6760 0.2 DRAP1 SAP130 POLR2A NFYC ZNF644 ZNF48 MIR3168 RN7SL597P
GH13I041108 Enhancer 0.5 ENCODE 0.4 -6.6 -6586 0.1 DRAP1 POLR2A SAP130 ZNF644 ZNF48 MIR3168 RN7SL597P
GH13I041086 Enhancer 0.4 ENCODE 0.4 +15.0 15000 0.2 SP1 POU5F1 RFX5 ELF1 WBP4 MTRF1 MIR3168
GH13I041077 Enhancer 0.3 FANTOM5 0.3 +23.5 23482 0.3 SPI1 ELF1 WBP4 MIR3168
GH13I041070 Enhancer 0.2 dbSUPER 0.3 +29.2 29202 3.1 WBP4 SLC25A15 ELF1 MIR3168
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR3168 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR3168 Gene

Genomic Locations for MIR3168 Gene
chr13:41,101,019-41,101,100
(GRCh38/hg38)
Size:
82 bases
Orientation:
Minus strand
chr13:41,675,155-41,675,236
(GRCh37/hg19)

Genomic View for MIR3168 Gene

Genes around MIR3168 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3168 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3168 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3168 Gene

ORGUL Member Location for MIR3168 Gene

ORGUL Member Location for MIR3168 gene

Proteins for MIR3168 Gene

Post-translational modifications for MIR3168 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3168 Gene

Domains & Families for MIR3168 Gene

Gene Families for MIR3168 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3168: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3168 Gene

Function for MIR3168 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3168 Gene

Localization for MIR3168 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3168 Gene

Pathways & Interactions for MIR3168 Gene

SuperPathways for MIR3168 Gene

No Data Available

Interacting Proteins for MIR3168 Gene

Gene Ontology (GO) - Biological Process for MIR3168 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3168 Gene

Drugs & Compounds for MIR3168 Gene

No Compound Related Data Available

Transcripts for MIR3168 Gene

mRNA/cDNA for MIR3168 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3168 Gene

No ASD Table

Relevant External Links for MIR3168 Gene

GeneLoc Exon Structure for
MIR3168
ECgene alternative splicing isoforms for
MIR3168

Expression for MIR3168 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR3168 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3168 Gene:

MIR3168
genes like me logo Genes that share expression patterns with MIR3168: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3168 Gene

Orthologs for MIR3168 Gene

Evolution for MIR3168 Gene

ENSEMBL:
Gene Tree for MIR3168 (if available)
TreeFam:
Gene Tree for MIR3168 (if available)

No data available for Orthologs for MIR3168 Gene

Paralogs for MIR3168 Gene

No data available for Paralogs for MIR3168 Gene

Variants for MIR3168 Gene

Sequence variations from dbSNP and Humsavar for MIR3168 Gene

SNP ID Clin Chr 13 pos Variation AA Info Type
rs1002116377 -- 41,101,217(-) T/G upstream_transcript_variant
rs1002448575 -- 41,101,212(-) A/T upstream_transcript_variant
rs1002479583 -- 41,101,572(-) C/T upstream_transcript_variant
rs1004566505 -- 41,102,315(-) C/T upstream_transcript_variant
rs1008425374 -- 41,101,938(-) A/C upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR3168 Gene

Variant ID Type Subtype PubMed ID
nsv832587 CNV gain 17160897

Additional Variant Information for MIR3168 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3168

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3168 Gene

Disorders for MIR3168 Gene

Additional Disease Information for MIR3168

No disorders were found for MIR3168 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3168 Gene

Publications for MIR3168 Gene

  1. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark MS … Hayward NK (PloS one 2010) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR3168 Gene

Sources for MIR3168 Gene

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