Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MIR3163 Gene

Subcategory (RNA class) for MIR3163 Gene


Quality Score for this RNA gene is


Aliases for MIR3163 Gene

  • MicroRNA 3163 2 3 5
  • Hsa-Mir-3163 3

External Ids for MIR3163 Gene

Previous GeneCards Identifiers for MIR3163 Gene

  • GC11U901739
  • GC11M066701

Summaries for MIR3163 Gene

Entrez Gene Summary for MIR3163 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3163 Gene

MIR3163 (MicroRNA 3163) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3163 Gene

Genomics for MIR3163 Gene

Regulatory Elements for MIR3163 Gene

Enhancers for MIR3163 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F066933 1.3 Ensembl ENCODE 0.8 -1.0 -953 4.6 PKNOX1 ATF1 ARNT BRCA1 GATA2 ELK1 FOS KDM4B NCOA1 REST RAD9A PC SYT12 LRFN4 RHOD LOC101928069 ACTN3 EIF1AD MIR3163 LOC105369355
GH11F066949 1.7 FANTOM5 Ensembl ENCODE 0.3 -17.2 -17182 4.3 HDGF PKNOX1 ARID4B SIN3A YY1 ZNF207 FOS DEK ZNF263 SP3 ACTN3 RBM14 ENSG00000258297 LOC105369353 LOC105369352 ENSG00000255038 FAM86C2P RCE1 SYT12 CCS
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR3163 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR3163 Gene

66,934,434 bp from pter
66,934,506 bp from pter
73 bases
Minus strand

Genomic View for MIR3163 Gene

Genes around MIR3163 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3163 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3163 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3163 Gene

Proteins for MIR3163 Gene

Post-translational modifications for MIR3163 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3163 Gene

Domains & Families for MIR3163 Gene

Gene Families for MIR3163 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3163: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3163 Gene

Function for MIR3163 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3163 Gene

Localization for MIR3163 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3163 Gene

Pathways & Interactions for MIR3163 Gene

SuperPathways for MIR3163 Gene

No Data Available

Interacting Proteins for MIR3163 Gene

Gene Ontology (GO) - Biological Process for MIR3163 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR3163 Gene

Transcripts for MIR3163 Gene

mRNA/cDNA for MIR3163 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3163 Gene

No ASD Table

Relevant External Links for MIR3163 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR3163 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3163 Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR3163 Gene

Orthologs for MIR3163 Gene

Evolution for MIR3163 Gene

Gene Tree for MIR3163 (if available)
Gene Tree for MIR3163 (if available)

No data available for Orthologs for MIR3163 Gene

Paralogs for MIR3163 Gene

No data available for Paralogs for MIR3163 Gene

Variants for MIR3163 Gene

Sequence variations from dbSNP and Humsavar for MIR3163 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs112840123 -- 66,934,853(+) ACCCG(C/T)CTCGG intron-variant, upstream-variant-2KB
rs11346699 -- 66,936,098(+) AAAAA(-/A)TCAGC intron-variant, upstream-variant-2KB
rs113533937 -- 66,936,275(+) AAGGT(-/G)GGGGG intron-variant, upstream-variant-2KB
rs114141576 -- 66,934,311(+) TCAGG(C/G)ACATG intron-variant, downstream-variant-500B
rs114324267 -- 66,935,996(+) ATCAT(G/T)TGAGC intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR3163 Gene

Variant ID Type Subtype PubMed ID
nsv555226 CNV gain 21841781
nsv832194 CNV gain+loss 17160897

Relevant External Links for MIR3163 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3163 Gene

Disorders for MIR3163 Gene

Relevant External Links for MIR3163

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR3163 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3163 Gene

Publications for MIR3163 Gene

  1. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark M.S. … Hayward N.K. (PLoS ONE 2010) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR3163 Gene

Sources for MIR3163 Gene

Loading form....