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Aliases for MIR3159 Gene

Subcategory (RNA class) for MIR3159 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3159 Gene

  • MicroRNA 3159 2 3
  • Hsa-Mir-3159 3

External Ids for MIR3159 Gene

Summaries for MIR3159 Gene

Entrez Gene Summary for MIR3159 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3159 Gene

MIR3159 (MicroRNA 3159) is a RNA Gene, and belongs to miRNA RNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3159 Gene

Genomics for MIR3159 Gene

Genomic Location for MIR3159 Gene

Start:
18,387,787 bp from pter
End:
18,387,860 bp from pter
Size:
74 bases
Orientation:
Plus strand

Genomic View for MIR3159 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR3159 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3159 Gene

No data available for Regulatory Elements for MIR3159 Gene

Proteins for MIR3159 Gene

Post-translational modifications for MIR3159 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3159 Gene

Domains for MIR3159 Gene

Gene Families for MIR3159 Gene

HGNC:
  • MIR :ncRNAs / Micro RNAs
genes like me logo Genes that share domains with MIR3159: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for MIR3159 Gene

Function for MIR3159 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR3159 Gene

Localization for MIR3159 Gene

No data available for Gene Ontology (GO) - Cellular Components for MIR3159 Gene

Pathways for MIR3159 Gene

SuperPathways for MIR3159 Gene

No Data Available

Interacting Proteins for MIR3159 Gene

Gene Ontology (GO) - Biological Process for MIR3159 Gene

None

No data available for Pathways by source for MIR3159 Gene

Transcripts for MIR3159 Gene

mRNA/cDNA for MIR3159 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3159 Gene

No ASD Table

Relevant External Links for MIR3159 Gene

GeneLoc Exon Structure for
MIR3159
ECgene alternative splicing isoforms for
MIR3159

Expression for MIR3159 Gene

No Expression Related Data Available

Orthologs for MIR3159 Gene

Evolution for MIR3159 Gene

ENSEMBL:
Gene Tree for MIR3159 (if available)
TreeFam:
Gene Tree for MIR3159 (if available)

No data available for Orthologs for MIR3159 Gene

Paralogs for MIR3159 Gene

No data available for Paralogs for MIR3159 Gene

Variants for MIR3159 Gene

Sequence variations from dbSNP and Humsavar for MIR3159 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs6486420 -- 18,388,301(+) gtggc(A/G)ggcgc downstream-variant-500B
rs7106099 -- 18,387,416(+) GGTAC(C/G)TACAT upstream-variant-2KB
rs7930299 -- 18,386,303(+) ttgag(A/G)tggag upstream-variant-2KB
rs9734697 -- 18,388,130(+) CAAAC(A/C)AGAAC downstream-variant-500B
rs12791100 -- 18,385,961(+) ggcct(A/C)ccaaa upstream-variant-2KB

Relevant External Links for MIR3159 Gene

HapMap Linkage Disequilibrium report
MIR3159

No data available for Structural Variations from Database of Genomic Variants (DGV) for MIR3159 Gene

Disorders for MIR3159 Gene

No disorders were found for MIR3159 Gene.

No data available for UniProtKB/Swiss-Prot for MIR3159 Gene

Publications for MIR3159 Gene

  1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
  2. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark M.S. … Hayward N.K. (PLoS ONE 2010) 3

Products for MIR3159 Gene

Sources for MIR3159 Gene

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