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Aliases for MIR3156-3 Gene

Subcategory (RNA class) for MIR3156-3 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3156-3 Gene

  • MicroRNA 3156-3 2 3 5
  • Hsa-Mir-3156-3 3
  • Mir-3156-3 3

External Ids for MIR3156-3 Gene

Previous GeneCards Identifiers for MIR3156-3 Gene

  • GC21U900399
  • GC21M014778

Summaries for MIR3156-3 Gene

Entrez Gene Summary for MIR3156-3 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3156-3 Gene

MIR3156-3 (MicroRNA 3156-3) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3156-3 Gene

Genomics for MIR3156-3 Gene

Genomic Location for MIR3156-3 Gene

Chromosome:
21
Start:
13,406,384 bp from pter
End:
13,406,460 bp from pter
Size:
77 bases
Orientation:
Minus strand

Genomic View for MIR3156-3 Gene

Genes around MIR3156-3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3156-3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3156-3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3156-3 Gene

No data available for Regulatory Elements for MIR3156-3 Gene

Proteins for MIR3156-3 Gene

Post-translational modifications for MIR3156-3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3156-3 Gene

Domains & Families for MIR3156-3 Gene

Gene Families for MIR3156-3 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3156-3: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3156-3 Gene

Function for MIR3156-3 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3156-3 Gene

Localization for MIR3156-3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3156-3 Gene

Pathways & Interactions for MIR3156-3 Gene

SuperPathways for MIR3156-3 Gene

No Data Available

Interacting Proteins for MIR3156-3 Gene

Gene Ontology (GO) - Biological Process for MIR3156-3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3156-3 Gene

Transcripts for MIR3156-3 Gene

mRNA/cDNA for MIR3156-3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3156-3 Gene

No ASD Table

Relevant External Links for MIR3156-3 Gene

GeneLoc Exon Structure for
MIR3156-3
ECgene alternative splicing isoforms for
MIR3156-3

Expression for MIR3156-3 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR3156-3 Gene

Orthologs for MIR3156-3 Gene

Evolution for MIR3156-3 Gene

ENSEMBL:
Gene Tree for MIR3156-3 (if available)
TreeFam:
Gene Tree for MIR3156-3 (if available)

No data available for Orthologs for MIR3156-3 Gene

Paralogs for MIR3156-3 Gene

No data available for Paralogs for MIR3156-3 Gene

Variants for MIR3156-3 Gene

Sequence variations from dbSNP and Humsavar for MIR3156-3 Gene

SNP ID Clin Chr 21 pos Sequence Context AA Info Type
rs111263126 -- 13,406,902(+) TTGCC(C/T)ATTCC upstream-variant-2KB
rs111923202 -- 13,406,583(+) CTAAA(G/T)GGAGT upstream-variant-2KB
rs112248965 -- 13,406,390(+) ACAGA(C/G)AGAAA nc-transcript-variant
rs116301423 -- 13,407,614(+) AACTA(A/C)GAGGG upstream-variant-2KB
rs116894217 -- 13,407,472(+) AAAAC(A/G)GGGCT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR3156-3 Gene

Variant ID Type Subtype PubMed ID
dgv36n64 CNV loss 17921354
dgv4377n100 CNV gain 25217958
dgv4378n100 CNV gain 25217958
dgv4379n100 CNV loss 25217958
dgv4381n100 CNV loss 25217958
dgv4382n100 CNV gain 25217958
dgv4383n100 CNV gain+loss 25217958
dgv4384n100 CNV gain 25217958
dgv4385n100 CNV gain 25217958
dgv7751n54 CNV gain 21841781
dgv7752n54 CNV loss 21841781
dgv7753n54 CNV loss 21841781
dgv7754n54 CNV loss 21841781
dgv7755n54 CNV loss 21841781
dgv93e203 CNV gain+loss 21179565
esv2751923 CNV loss 17911159
esv2758809 CNV gain+loss 17122850
esv34414 CNV gain 17911159
esv3646383 CNV loss 21293372
esv3646384 CNV gain 21293372
esv3893364 CNV gain+loss 25118596
esv3893367 CNV gain 25118596
nsv1056303 CNV gain 25217958
nsv1057131 CNV loss 25217958
nsv1057704 CNV loss 25217958
nsv1058202 CNV loss 25217958
nsv1059711 CNV gain 25217958
nsv1062730 CNV loss 25217958
nsv1064184 CNV gain 25217958
nsv428383 CNV loss 18775914
nsv442489 CNV loss 18776908
nsv459090 CNV loss 19166990
nsv469555 CNV loss 16826518
nsv469583 CNV loss 16826518
nsv470875 CNV gain 18288195
nsv470876 CNV loss 18288195
nsv471707 CNV gain+loss 15918152
nsv515654 CNV gain+loss 19592680
nsv586991 CNV loss 21841781
nsv586992 CNV gain 21841781
nsv587001 CNV loss 21841781
nsv817913 CNV gain 17921354
nsv964478 CNV duplication 23825009

Relevant External Links for MIR3156-3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3156-3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3156-3 Gene

Disorders for MIR3156-3 Gene

Relevant External Links for MIR3156-3

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR3156-3

No disorders were found for MIR3156-3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3156-3 Gene

Publications for MIR3156-3 Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 3 64
  2. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H. … Rovira C. (Cancer Res. 2011) 3 64
  3. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark M.S. … Hayward N.K. (PLoS ONE 2010) 3 64
  4. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR3156-3 Gene

Sources for MIR3156-3 Gene

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