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Aliases for MIR3155A Gene

Subcategory (RNA class) for MIR3155A Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3155A Gene

  • MicroRNA 3155a 2 3 5
  • MicroRNA 3155 2 3
  • Hsa-Mir-3155a 3
  • Hsa-Mir-3155 3
  • Mir-3155a 3
  • MIR3155 3

External Ids for MIR3155A Gene

Previous HGNC Symbols for MIR3155A Gene

  • MIR3155

Summaries for MIR3155A Gene

Entrez Gene Summary for MIR3155A Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3155A Gene

MIR3155A (MicroRNA 3155a) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3155A Gene

Genomics for MIR3155A Gene

Regulatory Elements for MIR3155A Gene

Enhancers for MIR3155A Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10F006150 1.5 FANTOM5 Ensembl ENCODE 0.8 -0.6 -596 2.4 HDAC1 ATF1 PKNOX1 SIN3A RAD21 YY1 ZNF143 ETV6 CREM ELF1 PFKFB3 IL15RA RBM17 GDI2 MIR3155A RN7SKP78
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR3155A on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR3155A Gene

Chromosome:
10
Start:
6,152,196 bp from pter
End:
6,152,277 bp from pter
Size:
82 bases
Orientation:
Plus strand

Genomic View for MIR3155A Gene

Genes around MIR3155A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3155A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3155A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3155A Gene

Proteins for MIR3155A Gene

Post-translational modifications for MIR3155A Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3155A Gene

Domains & Families for MIR3155A Gene

Gene Families for MIR3155A Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3155A: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3155A Gene

Function for MIR3155A Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3155A Gene

Localization for MIR3155A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3155A Gene

Pathways & Interactions for MIR3155A Gene

SuperPathways for MIR3155A Gene

No Data Available

Interacting Proteins for MIR3155A Gene

Gene Ontology (GO) - Biological Process for MIR3155A Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3155A Gene

Transcripts for MIR3155A Gene

mRNA/cDNA for MIR3155A Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3155A Gene

No ASD Table

Relevant External Links for MIR3155A Gene

GeneLoc Exon Structure for
MIR3155A
ECgene alternative splicing isoforms for
MIR3155A

Expression for MIR3155A Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR3155A Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3155A Gene:

MIR3155A
genes like me logo Genes that share expression patterns with MIR3155A: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR3155A Gene

Orthologs for MIR3155A Gene

Evolution for MIR3155A Gene

ENSEMBL:
Gene Tree for MIR3155A (if available)
TreeFam:
Gene Tree for MIR3155A (if available)

No data available for Orthologs for MIR3155A Gene

Paralogs for MIR3155A Gene

No data available for Paralogs for MIR3155A Gene

Variants for MIR3155A Gene

Sequence variations from dbSNP and Humsavar for MIR3155A Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs10795846 -- 6,152,412(+) AGGCT(C/T)CCCAA intron-variant, downstream-variant-500B, upstream-variant-2KB
rs10905905 -- 6,151,206(+) GTGTG(C/T)GGGTC intron-variant, upstream-variant-2KB
rs11256997 -- 6,150,848(+) TGAAC(A/C)ATTAG intron-variant, upstream-variant-2KB
rs11257001 -- 6,152,126(+) agatt(A/C)tggtc intron-variant, downstream-variant-500B, upstream-variant-2KB
rs114495714 -- 6,151,262(+) GGCAG(C/T)CACAA intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR3155A Gene

Variant ID Type Subtype PubMed ID
dgv1e49 CNV loss 18971310
esv3622241 CNV gain 21293372
nsv7198 OTHER inversion 18451855

Relevant External Links for MIR3155A Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3155A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3155A Gene

Disorders for MIR3155A Gene

Relevant External Links for MIR3155A

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR3155A

No disorders were found for MIR3155A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3155A Gene

Publications for MIR3155A Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 3 64
  2. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark M.S. … Hayward N.K. (PLoS ONE 2010) 3 64
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR3155A Gene

Sources for MIR3155A Gene

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