Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MIR3155A Gene

Subcategory (RNA class) for MIR3155A Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3155A Gene

  • MicroRNA 3155a 2 3 5
  • MicroRNA 3155 2 3
  • Hsa-Mir-3155a 3
  • Hsa-Mir-3155 3
  • Mir-3155a 3
  • MIR3155 3

External Ids for MIR3155A Gene

Previous HGNC Symbols for MIR3155A Gene

  • MIR3155

Summaries for MIR3155A Gene

Entrez Gene Summary for MIR3155A Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3155A Gene

MIR3155A (MicroRNA 3155a) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3155A Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3155A Gene

Genomics for MIR3155A Gene

GeneHancer (GH) Regulatory Elements for MIR3155A Gene

Promoters and enhancers for MIR3155A Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I006150 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 550.8 -0.7 -695 1.8 HDAC1 PKNOX1 ATF1 SIN3A ZBTB40 RAD21 ZNF143 ETV6 ATF7 IKZF2 GC10P006149 MIR3155A MIR3155B RN7SKP78 PFKFB3 IL15RA RBM17 GDI2 GC10M006147
GH10I006153 Enhancer 0.4 dbSUPER 550.8 +1.2 1180 0.3 ZNF217 CTBP1 ESR1 MIR3155A MIR3155B GC10M006147 PFKFB3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR3155A on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR3155A Gene

Genomic Locations for MIR3155A Gene
chr10:6,152,196-6,152,277
(GRCh38/hg38)
Size:
82 bases
Orientation:
Plus strand
chr10:6,194,159-6,194,240
(GRCh37/hg19)

Genomic View for MIR3155A Gene

Genes around MIR3155A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3155A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3155A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3155A Gene

Proteins for MIR3155A Gene

Post-translational modifications for MIR3155A Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3155A Gene

Domains & Families for MIR3155A Gene

Gene Families for MIR3155A Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3155A: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3155A Gene

Function for MIR3155A Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3155A Gene

Localization for MIR3155A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3155A Gene

Pathways & Interactions for MIR3155A Gene

SuperPathways for MIR3155A Gene

No Data Available

Interacting Proteins for MIR3155A Gene

Gene Ontology (GO) - Biological Process for MIR3155A Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3155A Gene

Drugs & Compounds for MIR3155A Gene

No Compound Related Data Available

Transcripts for MIR3155A Gene

mRNA/cDNA for MIR3155A Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3155A Gene

No ASD Table

Relevant External Links for MIR3155A Gene

GeneLoc Exon Structure for
MIR3155A
ECgene alternative splicing isoforms for
MIR3155A

Expression for MIR3155A Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR3155A Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3155A Gene:

MIR3155A
genes like me logo Genes that share expression patterns with MIR3155A: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3155A Gene

Orthologs for MIR3155A Gene

Evolution for MIR3155A Gene

ENSEMBL:
Gene Tree for MIR3155A (if available)
TreeFam:
Gene Tree for MIR3155A (if available)

No data available for Orthologs for MIR3155A Gene

Paralogs for MIR3155A Gene

No data available for Paralogs for MIR3155A Gene

Variants for MIR3155A Gene

Sequence variations from dbSNP and Humsavar for MIR3155A Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000889629 -- 6,150,375(+) G/T upstream_transcript_variant
rs1002290404 -- 6,150,440(+) A/G upstream_transcript_variant
rs1002341155 -- 6,150,599(+) G/A upstream_transcript_variant
rs1002520718 -- 6,151,484(+) A/G upstream_transcript_variant
rs1003064970 -- 6,151,699(+) A/G upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR3155A Gene

Variant ID Type Subtype PubMed ID
dgv1e49 CNV loss 18971310
esv3622241 CNV gain 21293372
nsv7198 OTHER inversion 18451855

Additional Variant Information for MIR3155A Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3155A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3155A Gene

Disorders for MIR3155A Gene

Additional Disease Information for MIR3155A

No disorders were found for MIR3155A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3155A Gene

Publications for MIR3155A Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 3 58
  2. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark MS … Hayward NK (PloS one 2010) 3 58
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR3155A Gene

Sources for MIR3155A Gene

Content
Loading form....