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Aliases for MIR3150A Gene

Subcategory (RNA class) for MIR3150A Gene

miRNA

Quality Score for this RNA gene is

8

Aliases for MIR3150A Gene

  • MicroRNA 3150a 2 3
  • MicroRNA 3150 2 3
  • Hsa-Mir-3150a 3
  • Hsa-Mir-3150 3
  • MIR3150 3

External Ids for MIR3150A Gene

Previous HGNC Symbols for MIR3150A Gene

  • MIR3150

Previous GeneCards Identifiers for MIR3150A Gene

  • GC08P096086

Summaries for MIR3150A Gene

Entrez Gene Summary for MIR3150A Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3150A Gene

MIR3150A (MicroRNA 3150a) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3150A Gene

Genomics for MIR3150A Gene

Genomic Location for MIR3150A Gene

Start:
95,072,914 bp from pter
End:
95,072,993 bp from pter
Size:
80 bases
Orientation:
Plus strand

Genomic View for MIR3150A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR3150A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3150A Gene

ORGUL Member Location for MIR3150A Gene

ORGUL Member Location for MIR3150A gene

No data available for Regulatory Elements for MIR3150A Gene

Proteins for MIR3150A Gene

Post-translational modifications for MIR3150A Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3150A Gene

Domains for MIR3150A Gene

Gene Families for MIR3150A Gene

HGNC:
  • MIR :ncRNAs / Micro RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3150A: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3150A Gene

Function for MIR3150A Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR3150A Gene

Localization for MIR3150A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3150A Gene

Pathways for MIR3150A Gene

SuperPathways for MIR3150A Gene

No Data Available

Interacting Proteins for MIR3150A Gene

Gene Ontology (GO) - Biological Process for MIR3150A Gene

None

No data available for Pathways by source for MIR3150A Gene

Transcripts for MIR3150A Gene

mRNA/cDNA for MIR3150A Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3150A Gene

No ASD Table

Relevant External Links for MIR3150A Gene

GeneLoc Exon Structure for
MIR3150A
ECgene alternative splicing isoforms for
MIR3150A

Expression for MIR3150A Gene

No Expression Related Data Available

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for MIR3150A Gene

Orthologs for MIR3150A Gene

Evolution for MIR3150A Gene

ENSEMBL:
Gene Tree for MIR3150A (if available)
TreeFam:
Gene Tree for MIR3150A (if available)

No data available for Orthologs for MIR3150A Gene

Paralogs for MIR3150A Gene

No data available for Paralogs for MIR3150A Gene

Variants for MIR3150A Gene

Sequence variations from dbSNP and Humsavar for MIR3150A Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type MAF
rs2678825 -- 95,071,696(+) TTCCT(C/T)ATTAG upstream-variant-2KB
rs2678826 -- 95,071,733(+) GTGTC(C/T)CTCCT upstream-variant-2KB
rs10583999 -- 95,071,404(+) AAAAA(-/A)GCATA upstream-variant-2KB
rs34778035 -- 95,071,247(+) AAAAA(-/AA)TTAGC upstream-variant-2KB
rs35022394 -- 95,071,235(+) AATAC(-/A)AAAAA upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR3150A Gene

Variant ID Type Subtype PubMed ID
nsv508520 CNV Loss 20534489
nsv891205 CNV Loss 21882294

Relevant External Links for MIR3150A Gene

HapMap Linkage Disequilibrium report
MIR3150A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for MIR3150A Gene

Disorders for MIR3150A Gene

No disorders were found for MIR3150A Gene.

No data available for UniProtKB/Swiss-Prot for MIR3150A Gene

Publications for MIR3150A Gene

  1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
  2. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark M.S. … Hayward N.K. (PLoS ONE 2010) 3
  3. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H. … Rovira C. (Cancer Res. 2011) 3

Products for MIR3150A Gene

Sources for MIR3150A Gene

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