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Aliases for MIR3149 Gene

Subcategory (RNA class) for MIR3149 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3149 Gene

  • MicroRNA 3149 2 3
  • Hsa-Mir-3149 3
  • AC090810.1 5

External Ids for MIR3149 Gene

Previous GeneCards Identifiers for MIR3149 Gene

  • GC08U901413
  • GC08M077884

Summaries for MIR3149 Gene

Entrez Gene Summary for MIR3149 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3149 Gene

MIR3149 (MicroRNA 3149) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3149 Gene

Genomics for MIR3149 Gene

Regulatory Elements for MIR3149 Gene

Enhancers for MIR3149 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around MIR3149 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR3149 Gene

Chromosome:
8
Start:
76,966,759 bp from pter
End:
76,966,870 bp from pter
Size:
112 bases
Orientation:
Minus strand

Genomic View for MIR3149 Gene

Genes around MIR3149 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3149 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3149 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3149 Gene

Proteins for MIR3149 Gene

Post-translational modifications for MIR3149 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3149 Gene

Domains & Families for MIR3149 Gene

Gene Families for MIR3149 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3149: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3149 Gene

Function for MIR3149 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3149 Gene

Localization for MIR3149 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3149 Gene

Pathways & Interactions for MIR3149 Gene

SuperPathways for MIR3149 Gene

No Data Available

Interacting Proteins for MIR3149 Gene

Gene Ontology (GO) - Biological Process for MIR3149 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3149 Gene

Drugs & Compounds for MIR3149 Gene

No Compound Related Data Available

Transcripts for MIR3149 Gene

mRNA/cDNA for MIR3149 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3149 Gene

No ASD Table

Relevant External Links for MIR3149 Gene

GeneLoc Exon Structure for
MIR3149
ECgene alternative splicing isoforms for
MIR3149

Expression for MIR3149 Gene

mRNA expression in normal human tissues for MIR3149 Gene

genes like me logo Genes that share expression patterns with MIR3149: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MIR3149 Gene

Orthologs for MIR3149 Gene

Evolution for MIR3149 Gene

ENSEMBL:
Gene Tree for MIR3149 (if available)
TreeFam:
Gene Tree for MIR3149 (if available)

No data available for Orthologs for MIR3149 Gene

Paralogs for MIR3149 Gene

No data available for Paralogs for MIR3149 Gene

Variants for MIR3149 Gene

Sequence variations from dbSNP and Humsavar for MIR3149 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs10100788 -- 76,967,561(+) TATAG(A/G)TAATG upstream-variant-2KB
rs10100957 -- 76,967,447(+) TTTAC(A/G)GATGT upstream-variant-2KB
rs4368951 -- 76,967,817(+) TGAAA(A/G)TCTAT upstream-variant-2KB
rs4504603 -- 76,967,280(+) AAGAC(C/T)AGCCT upstream-variant-2KB
rs4607579 -- 76,967,457(+) TATGT(A/G)TCCGA upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for MIR3149 Gene

Disorders for MIR3149 Gene

Relevant External Links for MIR3149

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR3149

No disorders were found for MIR3149 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3149 Gene

Publications for MIR3149 Gene

  1. Plasma miR-122 and miR-3149 Potentially Novel Biomarkers for Acute Coronary Syndrome. (PMID: 25933289) Li X. … Gu D. (PLoS ONE 2015) 3 67
  2. Discovery of novel microRNAs in female reproductive tract using next generation sequencing. (PMID: 20224791) Creighton C.J. … Gunaratne P.H. (PLoS ONE 2010) 3
  3. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark M.S. … Hayward N.K. (PLoS ONE 2010) 3
  4. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3

Products for MIR3149 Gene

Sources for MIR3149 Gene

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