Aliases for MIR3144 Gene
Subcategory (RNA class) for MIR3144 Gene
miRNA
Quality Score for this RNA gene is
3
External Ids for MIR3144 Gene
- HGNC: 38331
- Entrez Gene: 100422951
- Ensembl: ENSG00000265725
- miRBase: hsa-mir-3144
Previous GeneCards Identifiers for MIR3144 Gene
- GC06U901964
- GC06P120336
Summaries for MIR3144 Gene
-
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
GeneCards Summary for MIR3144 Gene
MIR3144 (MicroRNA 3144) is an RNA Gene, and is affiliated with the miRNA class.
Additional gene information for MIR3144 Gene
No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3144 Gene
Genomics for MIR3144 Gene
GeneHancer (GH) Regulatory Elements for MIR3144 Gene
Promoters and enhancers for MIR3144 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH06I120197 | Enhancer | 0.5 | ENCODE | 0.1 | +183.2 | 183160 | 1.2 | FOSL1 JUND CBFA2T3 CBFA2T2 | MIR3144 GC06M120527 RNU6-214P | |
| GH06I119856 | Enhancer | 0.4 | Ensembl | 0.1 | -158.7 | -158678 | 0.2 | IRF2 ZNF512 RUNX3 | LOC105377975 MIR3144 | |
| GH06I120278 | Enhancer | 0.4 | ENCODE | 0.1 | +264.1 | 264084 | 1.7 | POLR2A REST | GC06M120527 RNU6-214P MIR3144 | |
| GH06I120124 | Enhancer | 0.2 | FANTOM5 | 0.1 | +109.5 | 109527 | 0.4 | MIR3144 RNU6-214P GC06M120527 | ||
| GH06I120260 | Enhancer | 0.2 | ENCODE | 0.1 | +245.8 | 245751 | 0.2 | MIR3144 GC06M120527 RNU6-214P |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around MIR3144 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for MIR3144 Gene
Genomic Locations for MIR3144 Gene
- chr6:120,015,179-120,015,257
- (GRCh38/hg38)
- Size:
- 79 bases
- Orientation:
- Plus strand
- chr6:120,336,325-120,336,403
- (GRCh37/hg19)
Genomic View for MIR3144 Gene
Genes around MIR3144 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 6q22.31 by Ensembl
- 6q22.31 by Entrez Gene
- 6q22.31 by HGNC
MIR3144 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for MIR3144 Gene
Proteins for MIR3144 Gene
Post-translational modifications for MIR3144 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for MIR3144
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for MIR3144
- Origene Custom Protein Services for MIR3144
- Search GeneTex for Proteins for MIR3144
No data available for DME Specific Peptides for MIR3144 Gene
Domains & Families for MIR3144 Gene
Gene Families for MIR3144 Gene
- HGNC:
Graphical View of Domain Structure for InterPro Entry
No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3144 Gene
Function for MIR3144 Gene
Phenotypes From GWAS Catalog for MIR3144 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for MIR3144
-
- Search ViGene Biosciences for MIR3144
CRISPR Products
- Browse CRISPR knockouts for MIR3144
- Applied Biological Materials CRISPR for MIR3144
-
Vectors and viruses for KO, Activation, Repression, and more
Inhibitory RNA Products
- Search ViGene Biosciences for MIR3144
Clone Products
- GenScript: Custom all cDNA clones Services for MIR3144
- VectorBuilder custom plasmid, inducible vectors for MIR3144
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for MIR3144
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for MIR3144
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3144 Gene
Localization for MIR3144 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3144 Gene
Transcripts for MIR3144 Gene
mRNA/cDNA for MIR3144 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for MIR3144
- Applied Biological Materials CRISPR for MIR3144
-
Vectors and viruses for KO, Activation, Repression, and more
Inhibitory RNA Products
- Search ViGene Biosciences for MIR3144
Clone Products
- GenScript: Custom all cDNA clones Services for MIR3144
- VectorBuilder custom plasmid, inducible vectors for MIR3144
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for MIR3144
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for MIR3144
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Expression for MIR3144 Gene
NURSA nuclear receptor signaling pathways regulating expression of MIR3144 Gene:
MIR3144
No Expression Related Data Available
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3144 Gene
Orthologs for MIR3144 Gene
No data available for Orthologs for MIR3144 Gene
Paralogs for MIR3144 Gene
No data available for Paralogs for MIR3144 Gene
Variants for MIR3144 Gene
| SNP ID | Clin | Chr 06 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1002535662 | -- | 120,014,029(+) | G/C | upstream_transcript_variant | |
| rs1003041457 | -- | 120,015,680(+) | T/C | downstream_transcript_variant | |
| rs1004593574 | -- | 120,015,338(+) | G/A | downstream_transcript_variant | |
| rs1004716267 | -- | 120,013,454(+) | A/G | upstream_transcript_variant | |
| rs1005599438 | -- | 120,014,011(+) | T/G | upstream_transcript_variant |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| nsv1016699 | CNV | loss | 25217958 |
| nsv1020108 | CNV | gain | 25217958 |
| nsv604561 | CNV | loss | 21841781 |
Additional Variant Information for MIR3144 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- MIR3144
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3144 Gene
Disorders for MIR3144 Gene
Additional Disease Information for MIR3144
No disorders were found for MIR3144 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3144 Gene
Publications for MIR3144 Gene
- Two less common human microRNAs miR-875 and miR-3144 target a conserved site of E6 oncogene in most high-risk human papillomavirus subtypes. (PMID: 25913515) Lin L … Li Y (Protein & cell 2015) 3 58
- miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 3 58
- Discovery of novel microRNAs in female reproductive tract using next generation sequencing. (PMID: 20224791) Creighton CJ … Gunaratne PH (PloS one 2010) 3 58
- Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark MS … Hayward NK (PloS one 2010) 3 58
- miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58
Products for MIR3144 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
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- Custom Antibody Services
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- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for MIR3144
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- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
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- GenScript: Custom all cDNA clones Services for MIR3144
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- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Browse Antibodies at Cloud-Clone Corp.
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- Browse Knockouts at Cloud-Clone Corp.
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- Cloud-Clone Corp. disease models service
- Browse cDNA clones at Cloud-Clone Corp.
- Browse primers at Cloud-Clone Corp.
- Cloud-Clone Corp. primary cells service
- Cyagen custom Knockout/knockin (KOKI) mouse models for MIR3144
- VectorBuilder custom plasmid, inducible vectors for MIR3144
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for MIR3144
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneTex for Antibodies for MIR3144
- Search GeneTex for Proteins for MIR3144
Sources for MIR3144 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew