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Aliases for MIR3142 Gene

Subcategory (RNA class) for MIR3142 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3142 Gene

  • MicroRNA 3142 2 3
  • Hsa-Mir-3142 3

External Ids for MIR3142 Gene

Previous GeneCards Identifiers for MIR3142 Gene

  • GC05U901396
  • GC05P159901

Summaries for MIR3142 Gene

Entrez Gene Summary for MIR3142 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3142 Gene

MIR3142 (MicroRNA 3142) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3142 Gene

Genomics for MIR3142 Gene

Genomic Location for MIR3142 Gene

Start:
160,474,402 bp from pter
End:
160,474,525 bp from pter
Size:
124 bases
Orientation:
Plus strand

Genomic View for MIR3142 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR3142 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3142 Gene

No data available for Regulatory Elements for MIR3142 Gene

Proteins for MIR3142 Gene

Post-translational modifications for MIR3142 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3142 Gene

Domains for MIR3142 Gene

Gene Families for MIR3142 Gene

HGNC:
  • MIR :ncRNAs / Micro RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3142: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3142 Gene

Function for MIR3142 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR3142 Gene

Localization for MIR3142 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3142 Gene

Pathways for MIR3142 Gene

SuperPathways for MIR3142 Gene

No Data Available

Interacting Proteins for MIR3142 Gene

Gene Ontology (GO) - Biological Process for MIR3142 Gene

None

No data available for Pathways by source for MIR3142 Gene

Transcripts for MIR3142 Gene

mRNA/cDNA for MIR3142 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3142 Gene

No ASD Table

Relevant External Links for MIR3142 Gene

GeneLoc Exon Structure for
MIR3142
ECgene alternative splicing isoforms for
MIR3142

Expression for MIR3142 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for MIR3142 Gene

Orthologs for MIR3142 Gene

Evolution for MIR3142 Gene

ENSEMBL:
Gene Tree for MIR3142 (if available)
TreeFam:
Gene Tree for MIR3142 (if available)

No data available for Orthologs for MIR3142 Gene

Paralogs for MIR3142 Gene

No data available for Paralogs for MIR3142 Gene

Variants for MIR3142 Gene

Sequence variations from dbSNP and Humsavar for MIR3142 Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type MAF
rs1895318 -- 160,473,049(-) cagga(G/T)ttcga upstream-variant-2KB
rs2961918 -- 160,474,401(+) TGAAT(A/C)TTCAG upstream-variant-2KB
rs4921289 -- 160,474,133(+) GTCTC(G/T)GCCTT upstream-variant-2KB
rs7379096 -- 160,473,045(+) ggtct(C/T)gaaat upstream-variant-2KB
rs7707080 -- 160,472,738(+) acaga(G/T)aatag upstream-variant-2KB

Relevant External Links for MIR3142 Gene

HapMap Linkage Disequilibrium report
MIR3142

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for MIR3142 Gene

Disorders for MIR3142 Gene

No disorders were found for MIR3142 Gene.

No data available for UniProtKB/Swiss-Prot for MIR3142 Gene

Publications for MIR3142 Gene

  1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
  2. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark M.S. … Hayward N.K. (PLoS ONE 2010) 3

Products for MIR3142 Gene

Sources for MIR3142 Gene

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