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Aliases for MIR3141 Gene

Subcategory (RNA class) for MIR3141 Gene


Quality Score for this RNA gene is


Aliases for MIR3141 Gene

  • MicroRNA 3141 2 3 5
  • Hsa-Mir-3141 3
  • Mir-3141 3

External Ids for MIR3141 Gene

Previous GeneCards Identifiers for MIR3141 Gene

  • GC05U901358
  • GC05M153975

Summaries for MIR3141 Gene

Entrez Gene Summary for MIR3141 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3141 Gene

MIR3141 (MicroRNA 3141) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3141 Gene

Genomics for MIR3141 Gene

Regulatory Elements for MIR3141 Gene

Enhancers for MIR3141 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05F154583 1.3 FANTOM5 ENCODE 0.4 +11.4 11430 2.0 TBP KLF17 ZNF2 RAD21 ZNF366 ELK1 RCOR1 FOS DEK ZNF263 HAND1 MRPL22 SAP30L MIR3141 CIR1P1
GH05F154575 0.5 ENCODE 0.3 +19.2 19233 2.5 TBP CTCF PKNOX1 ZIC2 RAD21 RFX5 ZNF664 CTBP1 SMC3 TCF7L2 MIR3141 CIR1P1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MIR3141 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR3141 Gene

154,596,012 bp from pter
154,596,072 bp from pter
61 bases
Minus strand

Genomic View for MIR3141 Gene

Genes around MIR3141 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3141 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3141 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3141 Gene

Proteins for MIR3141 Gene

Post-translational modifications for MIR3141 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3141 Gene

Domains & Families for MIR3141 Gene

Gene Families for MIR3141 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3141: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3141 Gene

Function for MIR3141 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3141 Gene

Localization for MIR3141 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3141 Gene

Pathways & Interactions for MIR3141 Gene

SuperPathways for MIR3141 Gene

No Data Available

Interacting Proteins for MIR3141 Gene

Gene Ontology (GO) - Biological Process for MIR3141 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR3141 Gene

Transcripts for MIR3141 Gene

mRNA/cDNA for MIR3141 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3141 Gene

No ASD Table

Relevant External Links for MIR3141 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR3141 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3141 Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR3141 Gene

Orthologs for MIR3141 Gene

Evolution for MIR3141 Gene

Gene Tree for MIR3141 (if available)
Gene Tree for MIR3141 (if available)

No data available for Orthologs for MIR3141 Gene

Paralogs for MIR3141 Gene

No data available for Paralogs for MIR3141 Gene

Variants for MIR3141 Gene

Sequence variations from dbSNP and Humsavar for MIR3141 Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type
rs111408893 -- 154,596,703(+) CAATC(-/T)TTTTT upstream-variant-2KB
rs111887562 -- 154,597,250(+) CAAAC(C/T)AAACA upstream-variant-2KB
rs11301180 -- 154,596,423(+) GTCTC(-/A)AAAAA upstream-variant-2KB
rs113971856 -- 154,596,869(+) GCTAA(A/T)TTTTT upstream-variant-2KB
rs114398928 -- 154,597,345(+) GAAGG(A/T)AGAAG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR3141 Gene

Variant ID Type Subtype PubMed ID
esv3607245 CNV loss 21293372
nsv520916 CNV loss 19592680

Relevant External Links for MIR3141 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3141 Gene

Disorders for MIR3141 Gene

Relevant External Links for MIR3141

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR3141 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3141 Gene

Publications for MIR3141 Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 3 64
  2. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark M.S. … Hayward N.K. (PLoS ONE 2010) 3 64
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR3141 Gene

Sources for MIR3141 Gene

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