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Aliases for MIR3138 Gene

Subcategory (RNA class) for MIR3138 Gene

miRNA

Quality Score for this RNA gene is

8

Aliases for MIR3138 Gene

  • MicroRNA 3138 2 3
  • Hsa-Mir-3138 3
  • Mir-3138 3

External Ids for MIR3138 Gene

Previous GeneCards Identifiers for MIR3138 Gene

  • GC04U901261
  • GC04M009413

Summaries for MIR3138 Gene

Entrez Gene Summary for MIR3138 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3138 Gene

MIR3138 (MicroRNA 3138) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3138 Gene

Genomics for MIR3138 Gene

Genomic Location for MIR3138 Gene

Chromosome:
4
Start:
10,078,611 bp from pter
End:
10,078,692 bp from pter
Size:
82 bases
Orientation:
Minus strand

Genomic View for MIR3138 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR3138 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3138 Gene

ORGUL Member Location for MIR3138 Gene

ORGUL Member Location for MIR3138 gene

No data available for Regulatory Elements for MIR3138 Gene

Proteins for MIR3138 Gene

Post-translational modifications for MIR3138 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3138 Gene

Domains & Families for MIR3138 Gene

Gene Families for MIR3138 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3138: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3138 Gene

Function for MIR3138 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3138 Gene

Localization for MIR3138 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3138 Gene

Pathways & Interactions for MIR3138 Gene

SuperPathways for MIR3138 Gene

No Data Available

Interacting Proteins for MIR3138 Gene

Gene Ontology (GO) - Biological Process for MIR3138 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3138 Gene

Drugs & Compounds for MIR3138 Gene

No Compound Related Data Available

Transcripts for MIR3138 Gene

mRNA/cDNA for MIR3138 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3138 Gene

No ASD Table

Relevant External Links for MIR3138 Gene

GeneLoc Exon Structure for
MIR3138
ECgene alternative splicing isoforms for
MIR3138

Expression for MIR3138 Gene

mRNA expression in normal human tissues for MIR3138 Gene

genes like me logo Genes that share expression patterns with MIR3138: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MIR3138 Gene

Orthologs for MIR3138 Gene

Evolution for MIR3138 Gene

ENSEMBL:
Gene Tree for MIR3138 (if available)
TreeFam:
Gene Tree for MIR3138 (if available)

No data available for Orthologs for MIR3138 Gene

Paralogs for MIR3138 Gene

No data available for Paralogs for MIR3138 Gene

Variants for MIR3138 Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR3138 Gene

Variant ID Type Subtype PubMed ID
dgv1570e1 CNV Complex 17122850
dgv5476n71 CNV Gain 21882294
esv2752052 CNV Gain 17911159
nsv829857 CNV Gain 17160897
nsv469621 CNV Loss 16826518
nsv878692 CNV Gain 21882294
dgv1578e1 CNV Complex 17122850
nsv428438 CNV Gain 18775914

Relevant External Links for MIR3138 Gene

HapMap Linkage Disequilibrium report
MIR3138

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for MIR3138 Gene

Disorders for MIR3138 Gene

Relevant External Links for MIR3138

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR3138
genes like me logo Genes that share disorders with MIR3138: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3138 Gene

Publications for MIR3138 Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 67
  2. Discovery of novel microRNAs in female reproductive tract using next generation sequencing. (PMID: 20224791) Creighton C.J. … Gunaratne P.H. (PLoS ONE 2010) 67
  3. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark M.S. … Hayward N.K. (PLoS ONE 2010) 67
  4. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 67

Products for MIR3138 Gene

Sources for MIR3138 Gene

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