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Aliases for MIR3137 Gene

Subcategory (RNA class) for MIR3137 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3137 Gene

  • MicroRNA 3137 2 3 5
  • Hsa-Mir-3137 3

External Ids for MIR3137 Gene

Previous GeneCards Identifiers for MIR3137 Gene

  • GC03U901680
  • GC03M194855

Summaries for MIR3137 Gene

Entrez Gene Summary for MIR3137 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3137 Gene

MIR3137 (MicroRNA 3137) is an RNA Gene, and is affiliated with the miRNA class.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3137 Gene

Genomics for MIR3137 Gene

Regulatory Elements for MIR3137 Gene

Enhancers for MIR3137 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G195128 1.5 FANTOM5 ENCODE dbSUPER 0.7 +4.1 4053 3.6 PKNOX1 FOXA2 WRNIP1 SIN3A YY1 ZNF207 FOS JUNB TBX21 ZNF592 XXYLT1 XXYLT1-AS1 FAM43A LSG1 PPP1R2 MIR3137
GH03G195132 1.2 Ensembl ENCODE dbSUPER 0.7 +0.8 787 2.1 CTCF USF1 BHLHE40 USF2 JUNB RAD21 RARA NFIL3 POLR2A FOS XXYLT1-AS1 XXYLT1 FAM43A MIR3137
GH03G195115 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +15.7 15682 5.9 FOXA2 ATF1 ARNT FEZF1 TCF12 ELK1 GATA2 FOS NCOA1 REST XXYLT1-AS2 XXYLT1 RN7SL36P LSG1 XXYLT1-AS1 FAM43A ATP13A3 MIR3137
GH03G195138 1.5 Ensembl ENCODE dbSUPER 0.4 -6.2 -6162 3.7 HDGF PKNOX1 ATF1 CREB3L1 ARNT SIN3A TCF12 ZNF766 CBX5 ELK1 XXYLT1 RNU6-25P XXYLT1-AS1 FAM43A MIR3137 RN7SL36P
GH03G195100 2 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +31.0 30959 7.2 HDGF FOXA2 MLX ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZBTB7B XXYLT1-AS2 RN7SL36P FAM43A PPP1R2 ACAP2 XXYLT1-AS1 MIR3137
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR3137 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR3137 Gene

Chromosome:
3
Start:
195,134,506 bp from pter
End:
195,134,580 bp from pter
Size:
75 bases
Orientation:
Minus strand

Genomic View for MIR3137 Gene

Genes around MIR3137 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3137 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3137 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3137 Gene

Proteins for MIR3137 Gene

Post-translational modifications for MIR3137 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3137 Gene

Domains & Families for MIR3137 Gene

Gene Families for MIR3137 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3137: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3137 Gene

Function for MIR3137 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3137 Gene

Localization for MIR3137 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3137 Gene

Pathways & Interactions for MIR3137 Gene

SuperPathways for MIR3137 Gene

No Data Available

Interacting Proteins for MIR3137 Gene

Gene Ontology (GO) - Biological Process for MIR3137 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3137 Gene

Drugs & Compounds for MIR3137 Gene

No Compound Related Data Available

Transcripts for MIR3137 Gene

mRNA/cDNA for MIR3137 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3137 Gene

No ASD Table

Relevant External Links for MIR3137 Gene

GeneLoc Exon Structure for
MIR3137
ECgene alternative splicing isoforms for
MIR3137

Expression for MIR3137 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3137 Gene:

MIR3137
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3137 Gene

Orthologs for MIR3137 Gene

Evolution for MIR3137 Gene

ENSEMBL:
Gene Tree for MIR3137 (if available)
TreeFam:
Gene Tree for MIR3137 (if available)

No data available for Orthologs for MIR3137 Gene

Paralogs for MIR3137 Gene

No data available for Paralogs for MIR3137 Gene

Variants for MIR3137 Gene

Sequence variations from dbSNP and Humsavar for MIR3137 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1001683273 -- 195,134,526(+) CAGGA(A/G)CACGA intron-variant, nc-transcript-variant
rs1003092718 -- 195,135,759(+) TTCTA(C/T)AGTAA intron-variant, upstream-variant-2KB
rs1003631960 -- 195,134,737(+) CCAGA(A/C)AGGCC intron-variant, upstream-variant-2KB
rs1003688992 -- 195,134,307(+) CTTCA(C/T)ACTCA intron-variant, downstream-variant-500B
rs1006098437 -- 195,135,420(+) CAGGG(A/G)CAGGG intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR3137 Gene

Variant ID Type Subtype PubMed ID
esv3599226 CNV gain 21293372
nsv1001492 CNV gain 25217958
nsv1009796 CNV gain 25217958
nsv461126 CNV loss 19166990
nsv592981 CNV loss 21841781
nsv592982 CNV loss 21841781

Relevant External Links for MIR3137 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3137

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3137 Gene

Disorders for MIR3137 Gene

Relevant External Links for MIR3137

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR3137

No disorders were found for MIR3137 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3137 Gene

Publications for MIR3137 Gene

  1. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark M.S. … Hayward N.K. (PLoS ONE 2010) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR3137 Gene

Sources for MIR3137 Gene

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