Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MIR3136 Gene

Subcategory (RNA class) for MIR3136 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3136 Gene

  • MicroRNA 3136 2 3 5
  • Hsa-Mir-3136 3
  • Mir-3136 3

External Ids for MIR3136 Gene

Previous GeneCards Identifiers for MIR3136 Gene

  • GC03U901665
  • GC03M069099

Summaries for MIR3136 Gene

Entrez Gene Summary for MIR3136 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3136 Gene

MIR3136 (MicroRNA 3136) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3136 Gene

Genomics for MIR3136 Gene

Regulatory Elements for MIR3136 Gene

Enhancers for MIR3136 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F069050 0.2 ENCODE 0.8 -3.0 -2956 2.9 PKNOX1 ATF1 CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF48 BRCA1 YY1 UBA3 ARL6IP5 TMF1 MIR3136
GH03F069032 1 Ensembl ENCODE 0.3 +15.5 15492 2.0 HDGF CBX3 PKNOX1 INSM2 FEZF1 YBX1 ZNF121 GATA2 ZNF366 ETV6 ARL6IP5 TMF1 EOGT GC03M069017 MIR3136
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MIR3136 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR3136 Gene

Chromosome:
3
Start:
69,048,958 bp from pter
End:
69,049,035 bp from pter
Size:
78 bases
Orientation:
Minus strand

Genomic View for MIR3136 Gene

Genes around MIR3136 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3136 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3136 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3136 Gene

Proteins for MIR3136 Gene

Post-translational modifications for MIR3136 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3136 Gene

Domains & Families for MIR3136 Gene

Gene Families for MIR3136 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3136: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3136 Gene

Function for MIR3136 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3136 Gene

Localization for MIR3136 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3136 Gene

Pathways & Interactions for MIR3136 Gene

SuperPathways for MIR3136 Gene

No Data Available

Interacting Proteins for MIR3136 Gene

Gene Ontology (GO) - Biological Process for MIR3136 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3136 Gene

Transcripts for MIR3136 Gene

mRNA/cDNA for MIR3136 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3136 Gene

No ASD Table

Relevant External Links for MIR3136 Gene

GeneLoc Exon Structure for
MIR3136
ECgene alternative splicing isoforms for
MIR3136

Expression for MIR3136 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR3136 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3136 Gene:

MIR3136
genes like me logo Genes that share expression patterns with MIR3136: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR3136 Gene

Orthologs for MIR3136 Gene

Evolution for MIR3136 Gene

ENSEMBL:
Gene Tree for MIR3136 (if available)
TreeFam:
Gene Tree for MIR3136 (if available)

No data available for Orthologs for MIR3136 Gene

Paralogs for MIR3136 Gene

No data available for Paralogs for MIR3136 Gene

Variants for MIR3136 Gene

Sequence variations from dbSNP and Humsavar for MIR3136 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs10865643 -- 69,050,595(+) TATAT(A/G)TAAAA intron-variant, upstream-variant-2KB
rs111773236 -- 69,048,941(+) ACTTA(C/T)CAATA intron-variant, downstream-variant-500B
rs112573478 -- 69,049,232(+) AGCTG(A/G)GCCTG intron-variant, upstream-variant-2KB
rs114445898 -- 69,050,177(+) ATCAC(A/T)TGAGC intron-variant, upstream-variant-2KB
rs115614766 -- 69,049,218(+) AAATT(G/T)TTTTA intron-variant, upstream-variant-2KB

Relevant External Links for MIR3136 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3136

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR3136 Gene

Disorders for MIR3136 Gene

Relevant External Links for MIR3136

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR3136

No disorders were found for MIR3136 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3136 Gene

Publications for MIR3136 Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 3 64
  2. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H. … Rovira C. (Cancer Res. 2011) 3 64
  3. Discovery of new microRNAs by small RNAome deep sequencing in childhood acute lymphoblastic leukemia. (PMID: 21606961) Schotte D. … den Boer M.L. (Leukemia 2011) 3 64
  4. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark M.S. … Hayward N.K. (PLoS ONE 2010) 3 64
  5. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR3136 Gene

Sources for MIR3136 Gene

Content
Loading form....