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Aliases for MIR3135A Gene

Subcategory (RNA class) for MIR3135A Gene


Quality Score for this RNA gene is


Aliases for MIR3135A Gene

  • MicroRNA 3135a 2 3 5
  • MicroRNA 3135 2 3
  • Hsa-Mir-3135a 3
  • Hsa-Mir-3135 3
  • MIR3135 3

External Ids for MIR3135A Gene

Previous HGNC Symbols for MIR3135A Gene

  • MIR3135

Previous GeneCards Identifiers for MIR3135A Gene

  • GC03P020180

Summaries for MIR3135A Gene

Entrez Gene Summary for MIR3135A Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3135A Gene

MIR3135A (MicroRNA 3135a) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3135A Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3135A Gene

Genomics for MIR3135A Gene

GeneHancer (GH) Regulatory Elements for MIR3135A Gene

Promoters and enhancers for MIR3135A Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I020140 Enhancer 0.9 Ensembl ENCODE 0.8 +4.3 4305 1.9 SOX5 MEIS2 SOX13 GATAD2A PKNOX1 TFE3 FOXA2 SOX6 CEBPB CEBPG KAT2B SGO1 EFHB MIR3135A SGO1-AS1
GH03I020160 Enhancer 0.3 Ensembl 0.3 +23.0 23036 0.4 DACH1 KAT2B SGO1-AS1 MIR3135A SGO1
GH03I020161 Enhancer 0.3 FANTOM5 0.3 +22.7 22675 0.2 KAT2B SGO1-AS1 MIR3135A SGO1
GH03I020149 Enhancer 0.2 FANTOM5 0.4 +12.0 12028 0.2 SGO1 KAT2B MIR3135A SGO1-AS1
GH03I020158 Enhancer 0.2 FANTOM5 0.3 +21.1 21133 0.3 KAT2B SGO1-AS1 MIR3135A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR3135A on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR3135A Gene

Genomic Locations for MIR3135A Gene
77 bases
Plus strand

Genomic View for MIR3135A Gene

Genes around MIR3135A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3135A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3135A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3135A Gene

Proteins for MIR3135A Gene

Post-translational modifications for MIR3135A Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3135A Gene

Domains & Families for MIR3135A Gene

Gene Families for MIR3135A Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3135A: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3135A Gene

Function for MIR3135A Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3135A Gene

Localization for MIR3135A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3135A Gene

Pathways & Interactions for MIR3135A Gene

SuperPathways for MIR3135A Gene

No Data Available

Interacting Proteins for MIR3135A Gene

Gene Ontology (GO) - Biological Process for MIR3135A Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR3135A Gene

Drugs & Compounds for MIR3135A Gene

No Compound Related Data Available

Transcripts for MIR3135A Gene

mRNA/cDNA for MIR3135A Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3135A Gene

No ASD Table

Relevant External Links for MIR3135A Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR3135A Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR3135A Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3135A Gene:

genes like me logo Genes that share expression patterns with MIR3135A: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3135A Gene

Orthologs for MIR3135A Gene

Evolution for MIR3135A Gene

Gene Tree for MIR3135A (if available)
Gene Tree for MIR3135A (if available)

No data available for Orthologs for MIR3135A Gene

Paralogs for MIR3135A Gene

No data available for Paralogs for MIR3135A Gene

Variants for MIR3135A Gene

Sequence variations from dbSNP and Humsavar for MIR3135A Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1001308126 -- 20,137,405(+) G/T upstream_transcript_variant
rs1002212042 -- 20,137,736(+) GG/G downstream_transcript_variant
rs1002719713 -- 20,135,667(+) T/A upstream_transcript_variant
rs1004085127 -- 20,135,675(+) A/G upstream_transcript_variant
rs1007927601 -- 20,136,239(+) A/G upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR3135A Gene

Variant ID Type Subtype PubMed ID
esv23068 CNV gain+loss 19812545
esv2422249 CNV deletion 17116639
esv35078 CNV gain 17911159
esv3595471 CNV loss 21293372
esv3893667 CNV gain 25118596
nsv433359 CNV gain 18776910
nsv470450 CNV loss 18288195
nsv834627 CNV loss 17160897

Additional Variant Information for MIR3135A Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3135A Gene

Disorders for MIR3135A Gene

Additional Disease Information for MIR3135A

No disorders were found for MIR3135A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3135A Gene

Publications for MIR3135A Gene

  1. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark MS … Hayward NK (PloS one 2010) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR3135A Gene

Sources for MIR3135A Gene

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