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Aliases for MIR3131 Gene

Subcategory (RNA class) for MIR3131 Gene


Quality Score for this RNA gene is


Aliases for MIR3131 Gene

  • MicroRNA 3131 2 3 5
  • Hsa-Mir-3131 3
  • Mir-3131 3

External Ids for MIR3131 Gene

Previous GeneCards Identifiers for MIR3131 Gene

  • GC02U902098
  • GC02M219923

Summaries for MIR3131 Gene

Entrez Gene Summary for MIR3131 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3131 Gene

MIR3131 (MicroRNA 3131) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3131 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3131 Gene

Genomics for MIR3131 Gene

Regulatory Elements for MIR3131 Gene

Enhancers for MIR3131 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02H219059 1.2 ENCODE dbSUPER 0.7 -1.2 -1162 3.3 FOXA2 MLX ARID4B SIN3A DMAP1 SLC30A9 GLIS2 ZNF143 ATF7 SP5 LOC100129175 MIR375 IHH NHEJ1 SLC23A3 MIR3131
GH02H219058 1.1 ENCODE dbSUPER 0.7 +0.6 577 0.2 ELF3 RB1 ARID4B SIN3A RAD21 SLC30A9 ZNF143 MIXL1 THAP11 ZNF654 LOC100129175 MIR375 IHH NHEJ1 MIR3131 CFAP65
GH02H219042 0.5 dbSUPER 0.4 +16.0 15998 1.6 TFAP4 SCRT2 HNF4A MIER2 ZNF644 NHEJ1 IHH SLC23A3 CFAP65 MIR3131
GH02H219049 0.4 dbSUPER 0.4 +8.9 8890 1 TFAP4 SLC23A3 LOC100129175 MIR375 ENSG00000235024 CDK5R2 CRYBA2 FEV LINC00608 NHEJ1 IHH
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR3131 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR3131 Gene

Genomic Locations for MIR3131 Gene
63 bases
Minus strand

Genomic View for MIR3131 Gene

Genes around MIR3131 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3131 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3131 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3131 Gene

Proteins for MIR3131 Gene

Post-translational modifications for MIR3131 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3131 Gene

Domains & Families for MIR3131 Gene

Gene Families for MIR3131 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3131: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3131 Gene

Function for MIR3131 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3131 Gene

Localization for MIR3131 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3131 Gene

Pathways & Interactions for MIR3131 Gene

SuperPathways for MIR3131 Gene

No Data Available

Interacting Proteins for MIR3131 Gene

Gene Ontology (GO) - Biological Process for MIR3131 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR3131 Gene

Drugs & Compounds for MIR3131 Gene

No Compound Related Data Available

Transcripts for MIR3131 Gene

mRNA/cDNA for MIR3131 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3131 Gene

No ASD Table

Relevant External Links for MIR3131 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR3131 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3131 Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3131 Gene

Orthologs for MIR3131 Gene

Evolution for MIR3131 Gene

Gene Tree for MIR3131 (if available)
Gene Tree for MIR3131 (if available)

No data available for Orthologs for MIR3131 Gene

Paralogs for MIR3131 Gene

No data available for Paralogs for MIR3131 Gene

Variants for MIR3131 Gene

Sequence variations from dbSNP and Humsavar for MIR3131 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs121917852 Pathogenic 219,060,185(-) ACGAG(A/G)AGAAC upstream-variant-2KB, reference, missense
rs121917854 Pathogenic 219,060,168(-) GCCGA(A/C)CGCCT upstream-variant-2KB, reference, missense
rs121917855 Pathogenic 219,060,170(-) GCGCC(A/G)ACCGC upstream-variant-2KB, reference, missense
rs121917856 Pathogenic 219,060,331(-) CGTGC(C/T)GCTCG upstream-variant-2KB, reference, missense
rs121917859 Pathogenic 219,060,184(-) CGAGG(A/G)GAACA upstream-variant-2KB, reference, missense

Structural Variations from Database of Genomic Variants (DGV) for MIR3131 Gene

Variant ID Type Subtype PubMed ID
nsv954840 CNV deletion 24416366
nsv821902 CNV gain 20364138
nsv584491 CNV loss 21841781

Relevant External Links for MIR3131 Gene

Human Gene Mutation Database (HGMD)
SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3131 Gene

Disorders for MIR3131 Gene

Relevant External Links for MIR3131

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR3131 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3131 Gene

Publications for MIR3131 Gene

  1. An indel polymorphism within pre-miR3131 confers risk for hepatocellular carcinoma. (PMID: 28034876) Wang C … Gao Y (Carcinogenesis 2017) 3 60
  2. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 3 60
  3. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H … Rovira C (Cancer research 2011) 3 60
  4. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark MS … Hayward NK (PloS one 2010) 3 60
  5. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 60

Products for MIR3131 Gene

Sources for MIR3131 Gene

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