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Aliases for MIR3126 Gene

Subcategory (RNA class) for MIR3126 Gene


Quality Score for this RNA gene is


Aliases for MIR3126 Gene

  • MicroRNA 3126 2 3 5
  • Hsa-Mir-3126 3
  • Mir-3126 3

External Ids for MIR3126 Gene

Previous GeneCards Identifiers for MIR3126 Gene

  • GC02U902152
  • GC02P069330

Summaries for MIR3126 Gene

Entrez Gene Summary for MIR3126 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3126 Gene

MIR3126 (MicroRNA 3126) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3126 Gene

Genomics for MIR3126 Gene

Regulatory Elements for MIR3126 Gene

Enhancers for MIR3126 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F069080 1.6 FANTOM5 Ensembl ENCODE 0.3 -21.3 -21260 4.2 HDGF ATF1 MLX ARID4B SIN3A ZNF2 ZNF48 SLC30A9 GLIS2 ZNF143 LOC102724389 RNA5SP96 RNU6-1216P WDR92 ANTXR1 GMCL1 GKN1 MIR3126
GH02F069136 1.4 FANTOM5 Ensembl ENCODE 0.3 +39.9 39924 14.1 TBP ZFP64 RAD21 CHAMP1 RFX5 GATA2 SCRT2 RCOR1 FOS ZNF680 ANTXR1 RNU6-1216P RNA5SP96 WDR92 PNO1 GKN1 PROKR1 GC02M069149 MIR3126
GH02F069100 0.5 ENCODE 0.8 -3.4 -3411 1.0 JUND HLF FOXP2 RNA5SP96 RNU6-1216P ANTXR1 MIR3126
GH02F069099 0.4 ENCODE 0.8 -4.0 -4019 0.2 JUND RNU6-1216P RNA5SP96 MIR3126 ANTXR1
GH02F069103 0.4 ENCODE 0.8 +0.6 638 1.4 POLR2A GKN2 MIR3126 GC02M069149
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR3126 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR3126 Gene

69,103,682 bp from pter
69,103,755 bp from pter
74 bases
Plus strand

Genomic View for MIR3126 Gene

Genes around MIR3126 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3126 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3126 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3126 Gene

Proteins for MIR3126 Gene

Post-translational modifications for MIR3126 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3126 Gene

Domains & Families for MIR3126 Gene

Gene Families for MIR3126 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3126: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3126 Gene

Function for MIR3126 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3126 Gene

Localization for MIR3126 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3126 Gene

Pathways & Interactions for MIR3126 Gene

SuperPathways for MIR3126 Gene

No Data Available

Interacting Proteins for MIR3126 Gene

Gene Ontology (GO) - Biological Process for MIR3126 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR3126 Gene

Transcripts for MIR3126 Gene

mRNA/cDNA for MIR3126 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3126 Gene

No ASD Table

Relevant External Links for MIR3126 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR3126 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR3126 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3126 Gene:

genes like me logo Genes that share expression patterns with MIR3126: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR3126 Gene

Orthologs for MIR3126 Gene

Evolution for MIR3126 Gene

Gene Tree for MIR3126 (if available)
Gene Tree for MIR3126 (if available)

No data available for Orthologs for MIR3126 Gene

Paralogs for MIR3126 Gene

No data available for Paralogs for MIR3126 Gene

Variants for MIR3126 Gene

Sequence variations from dbSNP and Humsavar for MIR3126 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs10179227 -- 69,103,313(+) TGGTG(A/G)TGGTT intron-variant, upstream-variant-2KB
rs10865377 -- 69,102,075(+) GACAA(A/C)TGAGT intron-variant, upstream-variant-2KB
rs115618499 -- 69,103,543(+) GGAAT(A/T)TGGAG intron-variant, upstream-variant-2KB
rs11693314 -- 69,104,001(+) TGGCA(C/T)GATCT intron-variant, downstream-variant-500B
rs11900961 -- 69,103,281(+) CTACC(A/G)AGTGG intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR3126 Gene

Variant ID Type Subtype PubMed ID
nsv953142 CNV duplication 24416366

Relevant External Links for MIR3126 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3126 Gene

Disorders for MIR3126 Gene

Relevant External Links for MIR3126

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR3126 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3126 Gene

Publications for MIR3126 Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 3 64
  2. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H. … Rovira C. (Cancer Res. 2011) 3 64
  3. Discovery of novel microRNAs in female reproductive tract using next generation sequencing. (PMID: 20224791) Creighton C.J. … Gunaratne P.H. (PLoS ONE 2010) 3 64
  4. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark M.S. … Hayward N.K. (PLoS ONE 2010) 3 64
  5. Ago2 immunoprecipitation identifies predicted microRNAs in human embryonic stem cells and neural precursors. (PMID: 19784364) Goff L.A. … Hart R.P. (PLoS ONE 2009) 3 64

Products for MIR3126 Gene

Sources for MIR3126 Gene

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