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Aliases for MIR3122 Gene

Subcategory (RNA class) for MIR3122 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3122 Gene

  • MicroRNA 3122 2 3 5
  • Hsa-Mir-3122 3
  • Mir-3122 3

External Ids for MIR3122 Gene

Previous GeneCards Identifiers for MIR3122 Gene

  • GC01U903076
  • GC01P212250

Summaries for MIR3122 Gene

Entrez Gene Summary for MIR3122 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3122 Gene

MIR3122 (MicroRNA 3122) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3122 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3122 Gene

Genomics for MIR3122 Gene

GeneHancer (GH) Regulatory Elements for MIR3122 Gene

Promoters and enhancers for MIR3122 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I212077 Enhancer 0.6 ENCODE 550.8 -0.4 -399 0.2 MEIS2 PKNOX1 MAFG FOXA1 SREBF1 FOSL1 ZNF316 GATA3 CREB1 NFE2 MIR3122 INTS7 DTL TMEM206 RPL21P28
GH01I212087 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.4 +11.0 10957 1.3 FOXA2 MZF1 FEZF1 ZNF2 ZNF664 ZSCAN5C SCRT2 ZNF239 ZNF600 MAFK INTS7 DTL LOC102723727 PPP2R5A GC01P212093 MIR3122 GC01M212087
GH01I212083 Enhancer 0.4 FANTOM5 0.4 +6.2 6159 0.3 PRDM1 LINC00467 INTS7 DTL GC01P212093 MIR3122
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR3122 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR3122 Gene

Genomic Locations for MIR3122 Gene
chr1:212,077,613-212,077,685
(GRCh38/hg38)
Size:
73 bases
Orientation:
Plus strand
chr1:212,250,955-212,251,027
(GRCh37/hg19)

Genomic View for MIR3122 Gene

Genes around MIR3122 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3122 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3122 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3122 Gene

Proteins for MIR3122 Gene

Post-translational modifications for MIR3122 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3122 Gene

Domains & Families for MIR3122 Gene

Gene Families for MIR3122 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3122: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3122 Gene

Function for MIR3122 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3122 Gene

Localization for MIR3122 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3122 Gene

Pathways & Interactions for MIR3122 Gene

SuperPathways for MIR3122 Gene

No Data Available

Interacting Proteins for MIR3122 Gene

Gene Ontology (GO) - Biological Process for MIR3122 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3122 Gene

Drugs & Compounds for MIR3122 Gene

No Compound Related Data Available

Transcripts for MIR3122 Gene

mRNA/cDNA for MIR3122 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3122 Gene

No ASD Table

Relevant External Links for MIR3122 Gene

GeneLoc Exon Structure for
MIR3122
ECgene alternative splicing isoforms for
MIR3122

Expression for MIR3122 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR3122 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3122 Gene:

MIR3122
genes like me logo Genes that share expression patterns with MIR3122: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3122 Gene

Orthologs for MIR3122 Gene

Evolution for MIR3122 Gene

ENSEMBL:
Gene Tree for MIR3122 (if available)
TreeFam:
Gene Tree for MIR3122 (if available)

No data available for Orthologs for MIR3122 Gene

Paralogs for MIR3122 Gene

No data available for Paralogs for MIR3122 Gene

Variants for MIR3122 Gene

Sequence variations from dbSNP and Humsavar for MIR3122 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000713170 -- 212,077,863(+) C/T downstream_transcript_variant
rs1002827415 -- 212,077,758(+) G/T downstream_transcript_variant
rs1002839086 -- 212,077,496(+) A/G upstream_transcript_variant
rs1004954641 -- 212,077,143(+) C/T upstream_transcript_variant
rs1007003316 -- 212,076,559(+) A/C upstream_transcript_variant

Additional Variant Information for MIR3122 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3122

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR3122 Gene

Disorders for MIR3122 Gene

Additional Disease Information for MIR3122

No disorders were found for MIR3122 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3122 Gene

Publications for MIR3122 Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 3 58
  2. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark MS … Hayward NK (PloS one 2010) 3 58
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR3122 Gene

Sources for MIR3122 Gene

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