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Aliases for MIR3119-1 Gene

Subcategory (RNA class) for MIR3119-1 Gene

miRNA

Quality Score for this RNA gene is

8

Aliases for MIR3119-1 Gene

  • MicroRNA 3119-1 2 3
  • MicroRNA 3119-2 5
  • Hsa-Mir-3119-1 3
  • MIR3119-2 5

External Ids for MIR3119-1 Gene

Previous GeneCards Identifiers for MIR3119-1 Gene

  • GC01U902909

Summaries for MIR3119-1 Gene

Entrez Gene Summary for MIR3119-1 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3119-1 Gene

MIR3119-1 (MicroRNA 3119-1) is an RNA Gene, and is affiliated with the miRNA class.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3119-1 Gene

Genomics for MIR3119-1 Gene

Regulatory Elements for MIR3119-1 Gene

Enhancers for MIR3119-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G170162 0.8 Ensembl ENCODE 0.4 -11.5 -11480 1.1 ZNF664 POLR2A BHLHE40 SIN3A EP300 EZH2 METTL18 KIFAP3 MIR3119-1 LINC01681
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR3119-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR3119-1 Gene

Chromosome:
1
Start:
170,151,378 bp from pter
End:
170,151,462 bp from pter
Size:
85 bases
Orientation:
Minus strand

Genomic View for MIR3119-1 Gene

Genes around MIR3119-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3119-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3119-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3119-1 Gene

ORGUL Member Location for MIR3119-1 Gene

ORGUL Member Location for MIR3119-1 gene

Proteins for MIR3119-1 Gene

Post-translational modifications for MIR3119-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3119-1 Gene

Domains & Families for MIR3119-1 Gene

Gene Families for MIR3119-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3119-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3119-1 Gene

Function for MIR3119-1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3119-1 Gene

Localization for MIR3119-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3119-1 Gene

Pathways & Interactions for MIR3119-1 Gene

SuperPathways for MIR3119-1 Gene

No Data Available

Interacting Proteins for MIR3119-1 Gene

Gene Ontology (GO) - Biological Process for MIR3119-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3119-1 Gene

Drugs & Compounds for MIR3119-1 Gene

No Compound Related Data Available

Transcripts for MIR3119-1 Gene

mRNA/cDNA for MIR3119-1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3119-1 Gene

No ASD Table

Relevant External Links for MIR3119-1 Gene

GeneLoc Exon Structure for
MIR3119-1
ECgene alternative splicing isoforms for
MIR3119-1

Expression for MIR3119-1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR3119-1 Gene

genes like me logo Genes that share expression patterns with MIR3119-1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3119-1 Gene

Orthologs for MIR3119-1 Gene

Evolution for MIR3119-1 Gene

ENSEMBL:
Gene Tree for MIR3119-1 (if available)
TreeFam:
Gene Tree for MIR3119-1 (if available)

No data available for Orthologs for MIR3119-1 Gene

Paralogs for MIR3119-1 Gene

No data available for Paralogs for MIR3119-1 Gene

Variants for MIR3119-1 Gene

Sequence variations from dbSNP and Humsavar for MIR3119-1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1001999766 -- 170,151,336(+) TCTCT(A/T)GCGTT intron-variant, downstream-variant-500B, upstream-variant-2KB
rs1002587891 -- 170,152,730(+) TTGTT(A/G)ATGAA intron-variant, upstream-variant-2KB
rs1003501265 -- 170,151,310(+) TAATA(C/T)CTGGC intron-variant, downstream-variant-500B, upstream-variant-2KB
rs1005400608 -- 170,151,853(+) TATAA(C/T)GTTTA intron-variant, downstream-variant-500B, upstream-variant-2KB
rs1006007086 -- 170,153,234(+) ATAGC(A/C)ATGCA intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR3119-1 Gene

Variant ID Type Subtype PubMed ID
nsv1078878 OTHER inversion 25765185
nsv999310 CNV loss 25217958

Relevant External Links for MIR3119-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3119-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3119-1 Gene

Disorders for MIR3119-1 Gene

Relevant External Links for MIR3119-1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR3119-1

No disorders were found for MIR3119-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3119-1 Gene

Publications for MIR3119-1 Gene

  1. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark M.S. … Hayward N.K. (PLoS ONE 2010) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR3119-1 Gene

Sources for MIR3119-1 Gene

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