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Aliases for MIR3116-2 Gene

Subcategory (RNA class) for MIR3116-2 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3116-2 Gene

  • MicroRNA 3116-2 2 3
  • Hsa-Mir-3116-2 3

External Ids for MIR3116-2 Gene

Previous GeneCards Identifiers for MIR3116-2 Gene

  • GC01U903066
  • GC01M062544

Summaries for MIR3116-2 Gene

Entrez Gene Summary for MIR3116-2 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3116-2 Gene

MIR3116-2 (MicroRNA 3116-2) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3116-2 Gene

Genomics for MIR3116-2 Gene

Genomic Location for MIR3116-2 Gene

Start:
62,078,789 bp from pter
End:
62,078,856 bp from pter
Size:
68 bases
Orientation:
Minus strand

Genomic View for MIR3116-2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR3116-2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3116-2 Gene

No data available for Regulatory Elements for MIR3116-2 Gene

Proteins for MIR3116-2 Gene

Post-translational modifications for MIR3116-2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3116-2 Gene

Domains for MIR3116-2 Gene

Gene Families for MIR3116-2 Gene

HGNC:
  • MIR :ncRNAs / Micro RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3116-2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3116-2 Gene

Function for MIR3116-2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR3116-2 Gene

Localization for MIR3116-2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3116-2 Gene

Pathways for MIR3116-2 Gene

SuperPathways for MIR3116-2 Gene

No Data Available

Interacting Proteins for MIR3116-2 Gene

Gene Ontology (GO) - Biological Process for MIR3116-2 Gene

None

No data available for Pathways by source for MIR3116-2 Gene

Transcripts for MIR3116-2 Gene

mRNA/cDNA for MIR3116-2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate MIR3116-2
    • Block miRNA regulation of MIR3116-2 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for MIR3116-2

    Primer Products

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for MIR3116-2 Gene

    No ASD Table

    Relevant External Links for MIR3116-2 Gene

    GeneLoc Exon Structure for
    MIR3116-2
    ECgene alternative splicing isoforms for
    MIR3116-2

    Expression for MIR3116-2 Gene

    No Expression Related Data Available

    In Situ Assay Products

    No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for MIR3116-2 Gene

    Orthologs for MIR3116-2 Gene

    Evolution for MIR3116-2 Gene

    ENSEMBL:
    Gene Tree for MIR3116-2 (if available)
    TreeFam:
    Gene Tree for MIR3116-2 (if available)

    No data available for Orthologs for MIR3116-2 Gene

    Paralogs for MIR3116-2 Gene

    No data available for Paralogs for MIR3116-2 Gene

    Variants for MIR3116-2 Gene

    Relevant External Links for MIR3116-2 Gene

    HapMap Linkage Disequilibrium report
    MIR3116-2

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for MIR3116-2 Gene

    Disorders for MIR3116-2 Gene

    No disorders were found for MIR3116-2 Gene.

    No data available for UniProtKB/Swiss-Prot for MIR3116-2 Gene

    Publications for MIR3116-2 Gene

    1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
    2. Discovery of novel microRNAs in female reproductive tract using next generation sequencing. (PMID: 20224791) Creighton C.J. … Gunaratne P.H. (PLoS ONE 2010) 3
    3. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark M.S. … Hayward N.K. (PLoS ONE 2010) 3

    Products for MIR3116-2 Gene

    Sources for MIR3116-2 Gene

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