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Aliases for MIR3116-1 Gene

Subcategory (RNA class) for MIR3116-1 Gene


Quality Score for this RNA gene is


Aliases for MIR3116-1 Gene

  • MicroRNA 3116-1 2 3 5
  • Hsa-Mir-3116-1 3

External Ids for MIR3116-1 Gene

Previous GeneCards Identifiers for MIR3116-1 Gene

  • GC01U902833
  • GC01P062544

Summaries for MIR3116-1 Gene

Entrez Gene Summary for MIR3116-1 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3116-1 Gene

MIR3116-1 (MicroRNA 3116-1) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3116-1 Gene

Genomics for MIR3116-1 Gene

Genomic Location for MIR3116-1 Gene

62,078,786 bp from pter
62,078,859 bp from pter
74 bases
Plus strand

Genomic View for MIR3116-1 Gene

Genes around MIR3116-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3116-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3116-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3116-1 Gene

No data available for Regulatory Elements for MIR3116-1 Gene

Proteins for MIR3116-1 Gene

Post-translational modifications for MIR3116-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3116-1 Gene

Domains & Families for MIR3116-1 Gene

Gene Families for MIR3116-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3116-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3116-1 Gene

Function for MIR3116-1 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3116-1 Gene

Localization for MIR3116-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3116-1 Gene

Pathways & Interactions for MIR3116-1 Gene

SuperPathways for MIR3116-1 Gene

No Data Available

Interacting Proteins for MIR3116-1 Gene

Gene Ontology (GO) - Biological Process for MIR3116-1 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR3116-1 Gene

Transcripts for MIR3116-1 Gene

mRNA/cDNA for MIR3116-1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3116-1 Gene

No ASD Table

Relevant External Links for MIR3116-1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR3116-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR3116-1 Gene

Orthologs for MIR3116-1 Gene

Evolution for MIR3116-1 Gene

Gene Tree for MIR3116-1 (if available)
Gene Tree for MIR3116-1 (if available)

No data available for Orthologs for MIR3116-1 Gene

Paralogs for MIR3116-1 Gene

No data available for Paralogs for MIR3116-1 Gene

Variants for MIR3116-1 Gene

Sequence variations from dbSNP and Humsavar for MIR3116-1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs10630161 -- 62,077,689(+) CCAAA(-/AAG)AAAAA intron-variant, upstream-variant-2KB
rs11207898 -- 62,079,353(+) TTGGA(C/T)TGCAC intron-variant, downstream-variant-500B, upstream-variant-2KB
rs114017022 -- 62,076,801(+) TCTGC(A/G)GCTTG intron-variant, upstream-variant-2KB
rs114344709 -- 62,078,164(+) GCTGG(C/G)GATGG intron-variant, upstream-variant-2KB
rs11439364 -- 62,077,702(+) AAAAA(-/AAA)GAAGA intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR3116-1 Gene

Variant ID Type Subtype PubMed ID
nsv1001667 CNV loss 25217958
nsv546417 CNV loss 21841781

Relevant External Links for MIR3116-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3116-1 Gene

Disorders for MIR3116-1 Gene

Relevant External Links for MIR3116-1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR3116-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3116-1 Gene

Publications for MIR3116-1 Gene

  1. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark M.S. … Hayward N.K. (PLoS ONE 2010) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR3116-1 Gene

Sources for MIR3116-1 Gene

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