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Aliases for MIR3115 Gene

Subcategory (RNA class) for MIR3115 Gene


Quality Score for this RNA gene is


Aliases for MIR3115 Gene

  • MicroRNA 3115 2 3 5
  • Hsa-Mir-3115 3
  • Mir-3115 3

External Ids for MIR3115 Gene

Previous GeneCards Identifiers for MIR3115 Gene

  • GC01U903064
  • GC01P023370

Summaries for MIR3115 Gene

Entrez Gene Summary for MIR3115 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3115 Gene

MIR3115 (MicroRNA 3115) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3115 Gene

Genomics for MIR3115 Gene

Regulatory Elements for MIR3115 Gene

Enhancers for MIR3115 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F023036 0.6 ENCODE 0.4 -8.1 -8083 0.2 CBX3 ARNT NFRKB FEZF1 ZBTB40 CBX5 ZNF143 SMARCA5 ZNF362 ZEB2 ELOA ZBTB40-IT1 RNU6-135P RNU6-514P MIR3115 KDM1A
GH01F023029 0.9 Ensembl 0.4 -14.4 -14405 0.2 ZNF121 YBX3 MTA2 IKZF1 LUZP1 KDM1A MIR3115
GH01F023018 0.5 ENCODE 0.3 -24.4 -24381 3.0 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YY1 ZNF143 ZNF263 SP3 NFYC ELOA RPL11 CDC42-IT1 ZBTB40-IT1 LINC01355 LACTBL1 ENSG00000271428 PNRC2 HTR1D KDM1A
GH01F023022 0.2 Ensembl 0.3 -21.5 -21505 0.4 TRIM28 LACTBL1 KDM1A MIR3115
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MIR3115 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR3115 Gene

23,044,305 bp from pter
23,044,372 bp from pter
68 bases
Plus strand

Genomic View for MIR3115 Gene

Genes around MIR3115 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3115 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3115 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3115 Gene

Proteins for MIR3115 Gene

Post-translational modifications for MIR3115 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3115 Gene

Domains & Families for MIR3115 Gene

Gene Families for MIR3115 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3115: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3115 Gene

Function for MIR3115 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3115 Gene

Localization for MIR3115 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3115 Gene

Pathways & Interactions for MIR3115 Gene

SuperPathways for MIR3115 Gene

No Data Available

Interacting Proteins for MIR3115 Gene

Gene Ontology (GO) - Biological Process for MIR3115 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR3115 Gene

Transcripts for MIR3115 Gene

mRNA/cDNA for MIR3115 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3115 Gene

No ASD Table

Relevant External Links for MIR3115 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR3115 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR3115 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3115 Gene:

genes like me logo Genes that share expression patterns with MIR3115: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR3115 Gene

Orthologs for MIR3115 Gene

Evolution for MIR3115 Gene

Gene Tree for MIR3115 (if available)
Gene Tree for MIR3115 (if available)

No data available for Orthologs for MIR3115 Gene

Paralogs for MIR3115 Gene

No data available for Paralogs for MIR3115 Gene

Variants for MIR3115 Gene

Sequence variations from dbSNP and Humsavar for MIR3115 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs10753551 -- 23,042,443(+) TTATT(A/T)TTTTT intron-variant, upstream-variant-2KB
rs10917346 -- 23,042,449(+) TTTTT(A/T)TTTTT intron-variant, upstream-variant-2KB
rs113831099 -- 23,043,925(+) GTGTA(C/T)AGTAA intron-variant, upstream-variant-2KB
rs12037295 -- 23,043,969(+) ATACT(C/T)CTTGC intron-variant, upstream-variant-2KB
rs12131849 -- 23,042,475(+) tgaga(C/T)ggagt intron-variant, upstream-variant-2KB

Relevant External Links for MIR3115 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR3115 Gene

Disorders for MIR3115 Gene

Relevant External Links for MIR3115

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR3115 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3115 Gene

Publications for MIR3115 Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 3 64
  2. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H. … Rovira C. (Cancer Res. 2011) 3 64
  3. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark M.S. … Hayward N.K. (PLoS ONE 2010) 3 64
  4. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR3115 Gene

Sources for MIR3115 Gene

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