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Aliases for MIR2392 Gene

Subcategory (RNA class) for MIR2392 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR2392 Gene

  • MicroRNA 2392 2 3 5
  • Hsa-Mir-2392 3

External Ids for MIR2392 Gene

Previous GeneCards Identifiers for MIR2392 Gene

  • GC14U901278
  • GC14P101282
  • GC14P101212
  • GC14P101794
  • GC14P102087
  • GC14P102321
  • GC14P102492

Summaries for MIR2392 Gene

Entrez Gene Summary for MIR2392 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR2392 Gene

MIR2392 (MicroRNA 2392) is an RNA Gene, and is affiliated with the miRNA class.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR2392 Gene

Genomics for MIR2392 Gene

Regulatory Elements for MIR2392 Gene

Enhancers for MIR2392 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14G100788 1.2 ENCODE dbSUPER 0.3 -23.8 -23754 5.5 ATF1 TCF12 GATA2 REST ZNF592 MBD2 SMARCA4 MYNN GLIS1 ETV4 DLK1 MIR493 MIR337 MIR127 MIR136 MIR431 RTL1 MIR433 BEGAIN MEG3
GH14G100801 0.8 ENCODE dbSUPER 0.4 -11.4 -11355 3.1 ZFP69B SCRT1 ZFHX2 ZNF692 SCRT2 CEBPG HNRNPL MIR2392 MEG3
GH14G100782 1 ENCODE dbSUPER 0.3 -29.4 -29444 5.6 GATAD2A TFAP4 FOXA2 FOXA3 HLF ZMYM3 REST ATF2 RAD21 JUND DLK1 MEG3 MIR2392
GH14G100796 0.7 ENCODE dbSUPER 0.4 -17.3 -17324 0.8 ZBTB33 MAFK MEG3 MIR2392
GH14G100808 0.6 dbSUPER 0.4 -6.1 -6121 0.7 CBX3 ZEB2 CBX1 CBX5 GLIS1 TRIM24 ZBTB33 ZSCAN29 TRIM28 SETDB1 MIR2392 MEG3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR2392 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR2392 Gene

Chromosome:
14
Start:
100,814,491 bp from pter
End:
100,814,574 bp from pter
Size:
84 bases
Orientation:
Plus strand

Genomic View for MIR2392 Gene

Genes around MIR2392 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR2392 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR2392 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR2392 Gene

Proteins for MIR2392 Gene

Post-translational modifications for MIR2392 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR2392 Gene

Domains & Families for MIR2392 Gene

Gene Families for MIR2392 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR2392: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR2392 Gene

Function for MIR2392 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR2392 Gene

Localization for MIR2392 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR2392 Gene

Pathways & Interactions for MIR2392 Gene

SuperPathways for MIR2392 Gene

No Data Available

Interacting Proteins for MIR2392 Gene

Gene Ontology (GO) - Biological Process for MIR2392 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR2392 Gene

Drugs & Compounds for MIR2392 Gene

No Compound Related Data Available

Transcripts for MIR2392 Gene

mRNA/cDNA for MIR2392 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR2392 Gene

No ASD Table

Relevant External Links for MIR2392 Gene

GeneLoc Exon Structure for
MIR2392
ECgene alternative splicing isoforms for
MIR2392

Expression for MIR2392 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR2392 Gene:

MIR2392
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR2392 Gene

Orthologs for MIR2392 Gene

Evolution for MIR2392 Gene

ENSEMBL:
Gene Tree for MIR2392 (if available)
TreeFam:
Gene Tree for MIR2392 (if available)

No data available for Orthologs for MIR2392 Gene

Paralogs for MIR2392 Gene

No data available for Paralogs for MIR2392 Gene

Variants for MIR2392 Gene

Sequence variations from dbSNP and Humsavar for MIR2392 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type
rs1000117210 -- 100,813,586(+) CTGTG(G/T)CAGTG upstream-variant-2KB
rs1001242230 -- 100,813,869(+) ATCGG(A/G)AGGTT upstream-variant-2KB
rs1001286082 -- 100,813,082(+) TGCTC(A/G)AGAAT upstream-variant-2KB
rs1004692975 -- 100,812,982(+) CTCGA(A/G)CACTT upstream-variant-2KB
rs1007557507 -- 100,814,805(+) GCTGG(C/T)CAGGC downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for MIR2392 Gene

Variant ID Type Subtype PubMed ID
esv2751158 CNV gain 17911159
esv3635516 CNV gain 21293372
nsv1041097 CNV gain 25217958
nsv470669 CNV loss 18288195
nsv483116 CNV gain 15286789
nsv832876 CNV loss 17160897

Relevant External Links for MIR2392 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR2392

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR2392 Gene

Disorders for MIR2392 Gene

Relevant External Links for MIR2392

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR2392

No disorders were found for MIR2392 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR2392 Gene

Publications for MIR2392 Gene

  1. Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs. (PMID: 20733160) Jima D.D. … Dave S.S. (Blood 2010) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR2392 Gene

Sources for MIR2392 Gene

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