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Aliases for MIR22HG Gene

Subcategory (RNA class) for MIR22HG Gene

antisense

Quality Score for this RNA gene is

13

Aliases for MIR22HG Gene

  • MIR22 Host Gene 2 3
  • MIR22 Host Gene (Non-Protein Coding) 2 3
  • C17orf91 3 4
  • Chromosome 17 Open Reading Frame 91 2

External Ids for MIR22HG Gene

ORGUL Members for MIR22HG Gene

Previous Symbols for MIR22HG Gene

  • C17orf91

Summaries for MIR22HG Gene

GeneCards Summary for MIR22HG Gene

MIR22HG (MIR22 Host Gene) is a RNA Gene, and belongs to antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR22HG Gene

Genomics for MIR22HG Gene

Genomic Location for MIR22HG Gene

Start:
1,711,493 bp from pter
End:
1,717,174 bp from pter
Size:
5,682 bases
Orientation:
Minus strand

Genomic View for MIR22HG Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR22HG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR22HG Gene

No data available for Regulatory Elements for MIR22HG Gene

Proteins for MIR22HG Gene

  • Protein details for MIR22HG Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q0VDD5-CQ091_HUMAN
    Recommended name:
    Putative uncharacterized protein encoded by MIR22HG
    Protein Accession:
    Q0VDD5
    Secondary Accessions:
    • Q0VDD6

    Protein attributes for MIR22HG Gene

    Size:
    57 amino acids
    Molecular mass:
    6478 Da
    Quaternary structure:
    No Data Available

neXtProt entry for MIR22HG Gene

Proteomics data for MIR22HG Gene at MOPED

Post-translational modifications for MIR22HG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR22HG Gene

Domains for MIR22HG Gene

Protein Domains for MIR22HG Gene

ProtoNet:
genes like me logo Genes that share domains with MIR22HG: view

No data available for Gene Families and UniProtKB/Swiss-Prot for MIR22HG Gene

Function for MIR22HG Gene

miRNA for MIR22HG Gene

miRTarBase miRNAs that target MIR22HG

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for MIR22HG Gene

Localization for MIR22HG Gene

No data available for Gene Ontology (GO) - Cellular Components for MIR22HG Gene

Pathways for MIR22HG Gene

SuperPathways for MIR22HG Gene

No Data Available

Interacting Proteins for MIR22HG Gene

Gene Ontology (GO) - Biological Process for MIR22HG Gene

None

No data available for Pathways by source for MIR22HG Gene

Transcripts for MIR22HG Gene

Unigene Clusters for MIR22HG Gene

MIR22 host gene (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MIR22HG Gene

ExUns: 1a · 1b · 1c ^ 2 ^ 3a · 3b · 3c ^ 4
SP1: - -
SP2:
SP3: -

Relevant External Links for MIR22HG Gene

GeneLoc Exon Structure for
MIR22HG
ECgene alternative splicing isoforms for
MIR22HG

Expression for MIR22HG Gene

mRNA expression in normal human tissues for MIR22HG Gene

SOURCE GeneReport for Unigene cluster for MIR22HG Gene Hs.597755

genes like me logo Genes that share expressions with MIR22HG: view

Orthologs for MIR22HG Gene

This gene was present in the common ancestor of chordates.

Orthologs for MIR22HG Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ptr-mir-22 37
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia bta-mir-22 37
  • 100 (a)
OneToOne
dog
(Canis familiaris)
Mammalia cfa-mir-22 37
  • 100 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Mir22 37
  • 100 (a)
OneToOne
Mir22hg 16
oppossum
(Monodelphis domestica)
Mammalia mdo-mir-22 37
  • 89 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia oan-mir-22 37
  • 70 (a)
OneToOne
chicken
(Gallus gallus)
Aves gga-mir-22 37
  • 75 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii CU442763.1 37
  • 72 (a)
OneToMany
dre-mir-22a 37
  • 81 (a)
OneToMany
dre-mir-22b 37
  • 68 (a)
OneToMany
Species with no ortholog for MIR22HG:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for MIR22HG Gene

ENSEMBL:
Gene Tree for MIR22HG (if available)
TreeFam:
Gene Tree for MIR22HG (if available)

Paralogs for MIR22HG Gene

No data available for Paralogs for MIR22HG Gene

Variants for MIR22HG Gene

Sequence variations from dbSNP and Humsavar for MIR22HG Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
rs34853504 -- 1,712,799(+) CCACG(A/G)TCTAC nc-transcript-variant, intron-variant
rs35856802 -- 1,712,724(+) AGTCT(-/T)ATCCC nc-transcript-variant, intron-variant
rs59282480 -- 1,712,723(+) TGAGT(C/T)TATCC nc-transcript-variant, intron-variant
rs61736712 -- 1,712,461(+) GCTGG(C/T)TGCCC nc-transcript-variant, intron-variant
rs62090013 -- 1,713,204(+) TCCTC(A/G)CATTG nc-transcript-variant, intron-variant

Structural Variations from Database of Genomic Variants (DGV) for MIR22HG Gene

Variant ID Type Subtype PubMed ID
nsv907502 CNV Loss 21882294
nsv907511 CNV Loss 21882294
nsv907515 CNV Loss 21882294
nsv827856 CNV Gain 20364138
nsv9490 CNV Loss 18304495
nsv470568 CNV Loss 18288195
nsv516886 CNV Loss 19592680
dgv3033n71 CNV Loss 21882294
nsv833335 CNV Gain+Loss 17160897

Relevant External Links for MIR22HG Gene

HapMap Linkage Disequilibrium report
MIR22HG

Disorders for MIR22HG Gene

No disorders were found for MIR22HG Gene.

No data available for UniProtKB/Swiss-Prot for MIR22HG Gene

Publications for MIR22HG Gene

  1. A "double adaptor" method for improved shotgun library construction. (PMID: 8619474) Andersson B. … Gibbs R.A. (Anal. Biochem. 1996) 2 3
  2. Large-scale concatenation cDNA sequencing. (PMID: 9110174) Yu W. … Gibbs R.A. (Genome Res. 1997) 2 3
  3. Identification of short-lived long non-coding RNAs as surrogate indicators for chemical stress response. (PMID: 24036268) Tani H. … Torimura M. (Biochem. Biophys. Res. Commun. 2013) 2 3
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for MIR22HG Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate MIR22HG
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for MIR22HG
    • Block miRNA regulation of MIR22HG using miScript Target Protectors

    Sources for MIR22HG Gene

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