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Aliases for MIR22HG Gene

Subcategory (RNA class) for MIR22HG Gene

miRNA

Quality Score for this RNA gene is

13

Aliases for MIR22HG Gene

  • MIR22 Host Gene 2 3 5
  • MIR22 Host Gene (Non-Protein Coding) 2 3
  • C17orf91 3 4
  • Chromosome 17 Open Reading Frame 91 2

External Ids for MIR22HG Gene

Previous HGNC Symbols for MIR22HG Gene

  • C17orf91

Previous GeneCards Identifiers for MIR22HG Gene

  • GC17M001616
  • GC17M001618
  • GC17M001623

Summaries for MIR22HG Gene

GeneCards Summary for MIR22HG Gene

MIR22HG (MIR22 Host Gene) is an RNA Gene, and is affiliated with the miRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR22HG Gene

Genomics for MIR22HG Gene

Regulatory Elements for MIR22HG Gene

Promoters for MIR22HG Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around MIR22HG on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR22HG Gene

Chromosome:
17
Start:
1,711,493 bp from pter
End:
1,717,174 bp from pter
Size:
5,682 bases
Orientation:
Minus strand

Genomic View for MIR22HG Gene

Genes around MIR22HG on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR22HG Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR22HG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR22HG Gene

Proteins for MIR22HG Gene

  • Protein details for MIR22HG Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q0VDD5-CQ091_HUMAN
    Recommended name:
    Putative uncharacterized protein encoded by MIR22HG
    Protein Accession:
    Q0VDD5
    Secondary Accessions:
    • Q0VDD6

    Protein attributes for MIR22HG Gene

    Size:
    57 amino acids
    Molecular mass:
    6478 Da
    Quaternary structure:
    No Data Available

neXtProt entry for MIR22HG Gene

Proteomics data for MIR22HG Gene at MOPED

Post-translational modifications for MIR22HG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR22HG Gene

Domains & Families for MIR22HG Gene

Gene Families for MIR22HG Gene

Protein Domains for MIR22HG Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR22HG: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR22HG Gene

Function for MIR22HG Gene

miRNA for MIR22HG Gene

miRTarBase miRNAs that target MIR22HG

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for MIR22HG Gene

Localization for MIR22HG Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR22HG Gene

Pathways & Interactions for MIR22HG Gene

SuperPathways for MIR22HG Gene

No Data Available

Interacting Proteins for MIR22HG Gene

Gene Ontology (GO) - Biological Process for MIR22HG Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR22HG Gene

Drugs & Compounds for MIR22HG Gene

No Compound Related Data Available

Transcripts for MIR22HG Gene

Unigene Clusters for MIR22HG Gene

MIR22 host gene (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MIR22HG Gene

ExUns: 1a · 1b · 1c ^ 2 ^ 3a · 3b · 3c ^ 4
SP1: - -
SP2:
SP3: -

Relevant External Links for MIR22HG Gene

GeneLoc Exon Structure for
MIR22HG
ECgene alternative splicing isoforms for
MIR22HG

Expression for MIR22HG Gene

mRNA expression in normal human tissues for MIR22HG Gene

SOURCE GeneReport for Unigene cluster for MIR22HG Gene Hs.597755

genes like me logo Genes that share expression patterns with MIR22HG: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MIR22HG Gene

Orthologs for MIR22HG Gene

This gene was present in the common ancestor of chordates.

Orthologs for MIR22HG Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ptr-mir-22 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia bta-mir-22 36
  • 100 (a)
OneToOne
dog
(Canis familiaris)
Mammalia cfa-mir-22 36
  • 100 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Mir22 36
  • 100 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia mdo-mir-22 36
  • 89 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia oan-mir-22 36
  • 70 (a)
OneToOne
chicken
(Gallus gallus)
Aves gga-mir-22 36
  • 75 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii CU442763.1 36
  • 72 (a)
OneToMany
dre-mir-22a 36
  • 81 (a)
OneToMany
dre-mir-22b 36
  • 68 (a)
OneToMany
Species with no ortholog for MIR22HG:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for MIR22HG Gene

ENSEMBL:
Gene Tree for MIR22HG (if available)
TreeFam:
Gene Tree for MIR22HG (if available)

Paralogs for MIR22HG Gene

No data available for Paralogs for MIR22HG Gene

Variants for MIR22HG Gene

Sequence variations from dbSNP and Humsavar for MIR22HG Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs59282480 -- 1,712,723(+) TGAGT(C/T)TATCC intron-variant, nc-transcript-variant
rs139610904 -- 1,713,395(+) ATCTG(C/T)GTGAC intron-variant, nc-transcript-variant
rs144696643 -- 1,713,108(+) CCCAC(C/T)AAGGG intron-variant, nc-transcript-variant
rs146092559 -- 1,712,387(+) ATCTC(A/C/G)GAGGC nc-transcript-variant
rs149344824 -- 1,712,536(+) GTGCT(C/T)TCCAG intron-variant, nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for MIR22HG Gene

Variant ID Type Subtype PubMed ID
nsv907502 CNV Loss 21882294
nsv907511 CNV Loss 21882294
nsv907515 CNV Loss 21882294
nsv827856 CNV Gain 20364138
nsv9490 CNV Loss 18304495
nsv470568 CNV Loss 18288195
nsv516886 CNV Loss 19592680
dgv3033n71 CNV Loss 21882294
nsv833335 CNV Gain+Loss 17160897

Relevant External Links for MIR22HG Gene

HapMap Linkage Disequilibrium report
MIR22HG

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR22HG Gene

Disorders for MIR22HG Gene

Relevant External Links for MIR22HG

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR22HG

No disorders were found for MIR22HG Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR22HG Gene

Publications for MIR22HG Gene

  1. Identification of short-lived long non-coding RNAs as surrogate indicators for chemical stress response. (PMID: 24036268) Tani H. … Torimura M. (Biochem. Biophys. Res. Commun. 2013) 2 3 67
  2. Large-scale concatenation cDNA sequencing. (PMID: 9110174) Yu W. … Gibbs R.A. (Genome Res. 1997) 2 3
  3. A "double adaptor" method for improved shotgun library construction. (PMID: 8619474) Andersson B. … Gibbs R.A. (Anal. Biochem. 1996) 2 3
  4. Discovery and fine mapping of serum protein loci through transethnic meta-analysis. (PMID: 23022100) Franceschini N. … Morris A.P. (Am. J. Hum. Genet. 2012) 3
  5. Common variants in the calcium-sensing receptor gene are associated with total serum calcium levels. (PMID: 20705733) O'Seaghdha C.M. … KAPttgen A. (Hum. Mol. Genet. 2010) 3

Products for MIR22HG Gene

Sources for MIR22HG Gene

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