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MIR221 Gene(RNA Gene)

MicroRNA 221

GCID:
GC0XM045746
GIFtS:
21
Genes Participants
UDN Logo

Aliases for MIR221 Gene

Subcategory (RNA class) for MIR221 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR221 Gene

  • MicroRNA 221 2 3 5
  • Hsa-Mir-221 3
  • MiRNA221 3
  • Mir-221 3
  • MIRN221 3

External Ids for MIR221 Gene

ORGUL Members for MIR221 Gene

Previous HGNC Symbols for MIR221 Gene

  • MIRN221

Previous GeneCards Identifiers for MIR221 Gene

  • GC0XM045492
  • GC0XM045605

Summaries for MIR221 Gene

Entrez Gene Summary for MIR221 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR221 Gene

MIR221 (MicroRNA 221) is an RNA Gene, and is affiliated with the miRNA class. Diseases associated with MIR221 include Benign Metastasizing Leiomyoma. Among its related pathways are miRs in Muscle Cell Differentiation and miRNAs involved in DDR.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR221 Gene

Genomics for MIR221 Gene

Products:

  1. Regulatory Element

Genomic Location for MIR221 Gene

Chromosome:
X
Start:
45,746,157 bp from pter
End:
45,746,266 bp from pter
Size:
110 bases
Orientation:
Minus strand

Genomic View for MIR221 Gene

Genes around MIR221 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR221 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR221 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for MIR221 Gene

No data available for Regulatory Elements for MIR221 Gene

Proteins for MIR221 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for MIR221 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR221 Gene

Domains & Families for MIR221 Gene

Gene Families for MIR221 Gene

HGNC:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR221: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR221 Gene

Function for MIR221 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR221 Gene

Localization for MIR221 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR221 Gene

Pathways & Interactions for MIR221 Gene

genes like me logo Genes that share pathways with MIR221: view

Pathways by source for MIR221 Gene

2 BioSystems pathways for MIR221 Gene
1 KEGG pathway for MIR221 Gene

Interacting Proteins for MIR221 Gene

Gene Ontology (GO) - Biological Process for MIR221 Gene

None

No data available for SIGNOR curated interactions for MIR221 Gene

Drugs & Compounds for MIR221 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for MIR221 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for MIR221 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR221 Gene

No ASD Table

Relevant External Links for MIR221 Gene

GeneLoc Exon Structure for
MIR221
ECgene alternative splicing isoforms for
MIR221

Expression for MIR221 Gene

Products:

  1. Primer

mRNA expression in normal human tissues for MIR221 Gene

mRNA expression in normal human tissues for MIR221 Gene
mRNA expression by GTEx for MIR221 Gene
genes like me logo Genes that share expression patterns with MIR221: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MIR221 Gene

Orthologs for MIR221 Gene

This gene was present in the common ancestor of chordates.

Orthologs for MIR221 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
 Mammalia bta-mir-221 36
  • 93 (a)
 OneToOne
dog
(Canis familiaris)
 Mammalia cfa-mir-221 36
  • 97 (a)
 OneToOne
oppossum
(Monodelphis domestica)
 Mammalia mdo-mir-221 36
  • 93 (a)
 OneToOne
mouse
(Mus musculus)
 Mammalia Mir221 36
  • 99 (a)
 OneToOne
platypus
(Ornithorhynchus anatinus)
 Mammalia oan-mir-221 36
  • 91 (a)
 OneToOne
chimpanzee
(Pan troglodytes)
 Mammalia ptr-mir-221 36
  • 100 (a)
 OneToOne
chicken
(Gallus gallus)
 Aves gga-mir-221 36
  • 91 (a)
 OneToOne
lizard
(Anolis carolinensis)
 Reptilia aca-mir-221 36
  • 89 (a)
 OneToOne
zebrafish
(Danio rerio)
 Actinopterygii dre-mir-221 36
  • 78 (a)
 OneToOne
Species with no ortholog for MIR221:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for MIR221 Gene

ENSEMBL:
Gene Tree for MIR221 (if available)
TreeFam:
Gene Tree for MIR221 (if available)

Paralogs for MIR221 Gene

No data available for Paralogs for MIR221 Gene

Variants for MIR221 Gene

Sequence variations from dbSNP and Humsavar for MIR221 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs7050391 -- 45,745,845(+) GGGTG(C/T)TATGC downstream-variant-500B
rs113054794 -- 45,746,238(+) TATGC(A/C)AGGTT nc-transcript-variant
rs181300453 -- 45,746,012(+) TCGTA(C/T)TGAAA downstream-variant-500B
rs182584022 -- 45,746,409(+) AAAAT(G/T)TCCTT upstream-variant-2KB
rs185905117 -- 45,746,095(+) GTTTA(C/T)ACCTC downstream-variant-500B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for MIR221 Gene

Disorders for MIR221 Gene

MalaCards: The human disease database

(1) MalaCards diseases for MIR221 Gene - From: GeneCards

Disorder Aliases PubMed IDs
benign metastasizing leiomyoma
  • benign metastasizing leiomyoma of uterus
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for MIR221

Genetic Association Database (GAD)
MIR221
Human Genome Epidemiology (HuGE) Navigator
MIR221
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR221
genes like me logo Genes that share disorders with MIR221: view

No data available for UniProtKB/Swiss-Prot and Genatlas for MIR221 Gene

Publications for MIR221 Gene

  1. Novel genetic variants in miR-191 gene and familial ovarian cancer. (PMID: 20167074) Shen J. … Zhao H. (BMC Cancer 2010) 3 48 67
  2. MicroRNA-221 regulates high glucose-induced endothelial dysfunction. (PMID: 19351599) Li Y. … Geng Y.J. (Biochem. Biophys. Res. Commun. 2009) 3 23
  3. HCV infection induces the upregulation of miR-221 in NF-I_B dependent manner. (PMID: 25433287) Ding C.L. … Wang W. (Virus Res. 2015) 3
  4. The investigation of miR-221-3p and PAK1 gene expressions in breast cancer cell lines. (PMID: 25447917) Ergun S. … Oztuzcu S. (Gene 2015) 3
  5. HBx protein-induced upregulation of microRNA-221 promotes aberrant proliferation in HBVa89related hepatocellular carcinoma by targeting estrogen receptor-I+. (PMID: 25483016) Chen J.J. … Zhang L.P. (Oncol. Rep. 2015) 3

Products for MIR221 Gene

Sources for MIR221 Gene

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