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Aliases for MIR217 Gene

Subcategory (RNA class) for MIR217 Gene

miRNA

Quality Score for this RNA gene is

9

Aliases for MIR217 Gene

  • MicroRNA 217 2 3 5
  • Hsa-Mir-217 3
  • Mir-217 3
  • MIRN217 3

External Ids for MIR217 Gene

Previous HGNC Symbols for MIR217 Gene

  • MIRN217

Previous GeneCards Identifiers for MIR217 Gene

  • GC02M056064
  • GC02M056210

Summaries for MIR217 Gene

Entrez Gene Summary for MIR217 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR217 Gene

MIR217 (MicroRNA 217) is an RNA Gene, and is affiliated with the miRNA class. Diseases associated with MIR217 include Pancreatic Ductal Adenocarcinoma and Pancreas Adenocarcinoma.

fRNAdb sequence ontologies for MIR217 Gene

  • miRNA: Small, ~22-nt, RNA molecule that is the endogenous transcript of a miRNA gene. Micro RNAs are produced from precursor molecules (SO:0000647) that can form local hairpin structures, which ordinarily are processed (via the Dicer pathway) such that a single miRNA molecule accumulates from one arm of a hairpin precursor molecule. Micro RNAs may trigger the cleavage of their target molecules or act as translational repressors.

View fRNAdb secondary structures for MIR217

Additional gene information for MIR217 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for MIR217 Gene

Genomics for MIR217 Gene

GeneHancer (GH) Regulatory Elements for MIR217 Gene

Promoters and enhancers for MIR217 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I056008 Enhancer 1 Ensembl ENCODE dbSUPER 11.3 -26.1 -26063 2 CTCF MXI1 ZNF654 USF1 RFX1 JUN MAX SIN3A REST MNT MIR217 MIR216A EFEMP1 GC02P056001 MIR216B MIR217HG ENSG00000272180 LOC105374690
GH02I055957 Enhancer 0.9 Ensembl ENCODE 11.3 +24.4 24392 1.4 PKNOX1 MXI1 JUN MAX SIN3A RAD21 RFX5 CTBP1 GATA3 SCRT2 EFEMP1 MIR217 MIR216A ENSG00000240401 ENSG00000272180 LOC105374690 GC02P055982
GH02I056015 Enhancer 0.8 Ensembl ENCODE dbSUPER 10.3 -32.9 -32874 0.9 ZNF692 REST PRDM1 MIR216A MIR217 GC02P056001 MIR216B MIR217HG ENSG00000272180 LOC105374690
GH02I056013 Enhancer 0.7 ENCODE dbSUPER 10.3 -31.1 -31140 0.5 PKNOX1 POLR2A SIN3A ZIC2 MIR216A MIR217 GC02P056001 MIR216B MIR217HG ENSG00000272180 LOC105374690
GH02I055961 Enhancer 0.6 ENCODE 11 +21.6 21595 0.2 CTCF ZNF654 TRIM22 REST ZNF2 RAD21 RFX5 MAFF ATF3 SMC3 MIR216A MIR217 ENSG00000272180 LOC105374690 GC02P055982
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR217 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR217 Gene

Genomic Locations for MIR217 Gene
chr2:55,982,967-55,983,076
(GRCh38/hg38)
Size:
110 bases
Orientation:
Minus strand
chr2:56,210,102-56,210,211
(GRCh37/hg19)

Genomic View for MIR217 Gene

Genes around MIR217 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR217 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR217 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR217 Gene

ORGUL Member Location for MIR217 Gene

ORGUL Member Location for MIR217 gene

Proteins for MIR217 Gene

Post-translational modifications for MIR217 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR217 Gene

Domains & Families for MIR217 Gene

Gene Families for MIR217 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR217: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR217 Gene

Function for MIR217 Gene

Phenotypes From GWAS Catalog for MIR217 Gene

Gene Ontology (GO) - Molecular Function for MIR217 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:1903231 mRNA binding involved in posttranscriptional gene silencing IDA 19786632
genes like me logo Genes that share ontologies with MIR217: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR217 Gene

Localization for MIR217 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR217 Gene

Pathways & Interactions for MIR217 Gene

SuperPathways for MIR217 Gene

No Data Available

Interacting Proteins for MIR217 Gene

Gene Ontology (GO) - Biological Process for MIR217 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016525 negative regulation of angiogenesis IDA 19786632
GO:0035195 gene silencing by miRNA IDA 19786632
GO:1901985 positive regulation of protein acetylation IDA 19786632
GO:2000774 positive regulation of cellular senescence IMP 19786632
genes like me logo Genes that share ontologies with MIR217: view

No data available for Pathways by source and SIGNOR curated interactions for MIR217 Gene

Drugs & Compounds for MIR217 Gene

No Compound Related Data Available

Transcripts for MIR217 Gene

fRNAdb Secondary structures for MIR217 Gene

  • FR232136

mRNA/cDNA for MIR217 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR217 Gene

No ASD Table

Relevant External Links for MIR217 Gene

GeneLoc Exon Structure for
MIR217
ECgene alternative splicing isoforms for
MIR217

Expression for MIR217 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR217 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR217 Gene:

MIR217
genes like me logo Genes that share expression patterns with MIR217: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR217 Gene

Orthologs for MIR217 Gene

This gene was present in the common ancestor of chordates.

Orthologs for MIR217 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ptr-mir-217 34
  • 100 (a)
OneToMany
-- 34
  • 99 (a)
OneToMany
dog
(Canis familiaris)
Mammalia cfa-mir-217 34
  • 96 (a)
OneToOne
cow
(Bos Taurus)
Mammalia bta-mir-217 34
  • 95 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia mdo-mir-217 34
  • 94 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Mir217 34
  • 85 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia oan-mir-217 34 34
  • 85 (a)
OneToMany
chicken
(Gallus gallus)
Aves gga-mir-217 34
  • 93 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia aca-mir-217 34
  • 85 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii dre-mir-217 34
  • 80 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea csa-mir-217 34
  • 51 (a)
OneToOne
Species where no ortholog for MIR217 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for MIR217 Gene

ENSEMBL:
Gene Tree for MIR217 (if available)
TreeFam:
Gene Tree for MIR217 (if available)

Paralogs for MIR217 Gene

No data available for Paralogs for MIR217 Gene

Variants for MIR217 Gene

Sequence variations from dbSNP and Humsavar for MIR217 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000536363 -- 55,983,465(-) G/A upstream_transcript_variant
rs1001749963 -- 55,985,051(-) G/A upstream_transcript_variant
rs1003377950 -- 55,983,954(-) A/G upstream_transcript_variant
rs1003427158 -- 55,983,716(-) T/C upstream_transcript_variant
rs1006012235 -- 55,984,247(-) A/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR217 Gene

Variant ID Type Subtype PubMed ID
esv2759051 CNV gain 17122850
esv3575244 CNV gain 25503493

Additional Variant Information for MIR217 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR217

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR217 Gene

Disorders for MIR217 Gene

MalaCards: The human disease database

(2) MalaCards diseases for MIR217 Gene - From: DISEASES and GeneCards

Disorder Aliases PubMed IDs
pancreatic ductal adenocarcinoma
  • ductal adenocarcinoma of the pancreas
pancreas adenocarcinoma
  • pancreatic adenocarcinoma
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for MIR217

genes like me logo Genes that share disorders with MIR217: view

No data available for UniProtKB/Swiss-Prot and Genatlas for MIR217 Gene

Publications for MIR217 Gene

  1. Vertebrate microRNA genes. (PMID: 12624257) Lim LP … Bartel DP (Science (New York, N.Y.) 2003) 1 3 58
  2. The Long Non-Coding RNA CRNDE Promotes Colorectal Carcinoma Progression by Competitively Binding miR-217 with TCF7L2 and Enhancing the Wnt/β-Catenin Signaling Pathway. (PMID: 28472810) Yu B … Li XX (Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology 2017) 3 58
  3. TTBK2 circular RNA promotes glioma malignancy by regulating miR-217/HNF1β/Derlin-1 pathway. (PMID: 28219405) Zheng J … Liu Y (Journal of hematology & oncology 2017) 3 58
  4. Decreased levels of miR-34a and miR-217 act as predictor biomarkers of aggressive progression and poor prognosis in hepatocellular carcinoma. (PMID: 27879964) Tian YW … Xue HZ (Minerva medica 2017) 3 58
  5. Changes of serum Mir-217 and the correlation with the severity in type 2 diabetes patients with different stages of diabetic kidney disease. (PMID: 27522360) Shao Y … Wang Q (Endocrine 2017) 3 58

Products for MIR217 Gene

Sources for MIR217 Gene

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